Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8k22
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 0.95
U41106-3|AAA82411.1| 261|Caenorhabditis elegans Hypothetical pr... 30 1.2
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 1.2
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 1.2
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 1.7
Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 2.2
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 2.2
U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 2.9
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 2.9
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 2.9
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 2.9
AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical... 29 2.9
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 3.8
U39742-2|AAM51521.1| 321|Caenorhabditis elegans Hypothetical pr... 28 3.8
U39742-1|AAK39198.1| 322|Caenorhabditis elegans Hypothetical pr... 28 3.8
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 28 5.0
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 6.7
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 27 6.7
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 30.3 bits (65), Expect = 0.95
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 139 QSSQEATHRWSPVLQYPDADRGHPEPRDAGAGVRQRVLA---RPLAQRVAPAPPPLRHAV 309
Q++++A + S V P + P P A A V+ L PAPPP AV
Sbjct: 328 QAARDALNSNSIVPDAPKVEEPEPAPTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPAV 387
Query: 310 PQAPQA 327
P+ QA
Sbjct: 388 PEEAQA 393
>U41106-3|AAA82411.1| 261|Caenorhabditis elegans Hypothetical
protein W06A11.3 protein.
Length = 261
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +2
Query: 383 VEHMERGAEISKIYCQRPIIQHTDCLNTSVLDCSVTFMVDKNICLLGVQVPTQ 541
++HM I + +C + + +H LN S +D + +CL+ V +
Sbjct: 19 LQHMHMTEIIFRSFCSKSVKRHLKSLNVSDVDLRIVLRKQPGVCLMYCHVSAE 71
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 193 ADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
A G P P+++ G + A+P A AP PPP H QAP
Sbjct: 1201 AQFGVPPPQNSAPGAQFG--AKPEASSHAPTPPPQPHPSYQAP 1241
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 193 ADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
A G P P+++ G + A+P A AP PPP H QAP
Sbjct: 1221 AQFGVPPPQNSAPGAQFG--AKPEASSHAPTPPPQPHPSYQAP 1261
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 142 SSQEATHRW-SPVLQY-PDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQ 315
SSQ+AT P Q P + P+P + A Q+ A+P+ Q+ A APP A Q
Sbjct: 391 SSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQK--AQPVTQQQASAPPTSPSAPVQ 448
Query: 316 AP 321
AP
Sbjct: 449 AP 450
>Z50176-4|CAA90541.1| 546|Caenorhabditis elegans Hypothetical
protein C09G1.4 protein.
Length = 546
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 133 YLQSSQEATHRWSPVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPP 294
Y+Q+S +A ++ + + +YP R P + G QR R L P P P
Sbjct: 184 YMQNSSDAQYKMNKI-EYPPVSRTPPVACSSRTGTLQRTPNRRLPISSTPQPQP 236
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 172 PVLQYPDADR--GHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
P Q+ A R G P+P+ + +V RP Q + PPP+ H + Q P
Sbjct: 422 PPPQHMQAQRLWGGPQPQRMNQPMMAQVGGRP-GQYIMGHPPPMHHQMQQGP 472
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 172 PVLQYPDADR--GHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
P Q+ A R G P+P+ + +V RP Q + PPP+ H + Q P
Sbjct: 422 PPPQHMQAQRLWGGPQPQRMNQPMMAQVGGRP-GQYIMGHPPPMHHQMQQGP 472
>U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical
protein B0310.2 protein.
Length = 413
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 172 PVLQYPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAP 321
P+ D+ +G P + A + V V+P PP L +PQ P
Sbjct: 130 PIFSSDDSVKGMPSRKRAKRSLEDTVQMLSKENSVSPPPPSLPFVLPQIP 179
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 187 PDADRGHPEPRDAG---AGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARR 333
P A+ PE + V + A P A++ +P+PPP R PQ+P R
Sbjct: 547 PTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRR-PQSPSPER 597
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 187 PDADRGHPEPRDAG---AGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARR 333
P A+ PE + V + A P A++ +P+PPP R PQ+P R
Sbjct: 497 PTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRR-PQSPSPER 547
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 187 PDADRGHPEPRDAG---AGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARR 333
P A+ PE + V + A P A++ +P+PPP R PQ+P R
Sbjct: 547 PTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRR-PQSPSPER 597
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 187 PDADRGHPEPRDAG---AGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQARR 333
P A+ PE + V + A P A++ +P+PPP R PQ+P R
Sbjct: 547 PTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRR-PQSPSPER 597
>AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical
protein R07C3.3 protein.
Length = 470
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 392 MERGAEISKIYCQRPIIQHTDC 457
++R E YC+RP QH DC
Sbjct: 49 VDRSCEEQGFYCKRPETQHVDC 70
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 184 YPDADRGHPEPRDAGAGVRQRVLARPLAQRVAPAPPPLRHAVPQAPQA 327
+P A G P AGA Q V P AP+ P VPQAP +
Sbjct: 177 FPQAG-GSPSSFQAGAPTSQNVQGYPGGPSSAPSAYPGAPQVPQAPNS 223
>U39742-2|AAM51521.1| 321|Caenorhabditis elegans Hypothetical
protein C25F6.7b protein.
Length = 321
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 244 RVLARPLAQRVAPAPPPLRHAVPQAPQARRCT 339
R+ PLA+ +P+PP +AV A + RRCT
Sbjct: 83 RLSPSPLARTPSPSPPDYENAV-NARRMRRCT 113
>U39742-1|AAK39198.1| 322|Caenorhabditis elegans Hypothetical
protein C25F6.7a protein.
Length = 322
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 244 RVLARPLAQRVAPAPPPLRHAVPQAPQARRCT 339
R+ PLA+ +P+PP +AV A + RRCT
Sbjct: 84 RLSPSPLARTPSPSPPDYENAV-NARRMRRCT 114
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 253 ARPLAQRVAPAPPPLRHAVPQAPQARRCTYVIN 351
A P VAP PPP + P P C+ IN
Sbjct: 188 ATPSPIFVAPLPPPPAYTTPDVPPEPMCSLRIN 220
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 250 LARPLAQRVAPAPPPLRHAVPQ 315
L+RP +++VAP PP HA Q
Sbjct: 386 LSRPYSEKVAPGVPPAWHAEAQ 407
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 250 LARPLAQRVAPAPPPLRHAVPQ 315
L+RP +++VAP PP HA Q
Sbjct: 551 LSRPYSEKVAPGVPPAWHAEAQ 572
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,352,267
Number of Sequences: 27780
Number of extensions: 234736
Number of successful extensions: 962
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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