Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8k09
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical pr...   155   2e-38
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...    88   5e-18
AC006827-4|AAF60881.1|  579|Caenorhabditis elegans Hypothetical ...    30   1.5  
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical
           protein K07C5.4 protein.
          Length = 486

 Score =  155 bits (377), Expect = 2e-38
 Identities = 77/169 (45%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
 Frame = +3

Query: 99  YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 278
           +VL+EH+AG+AL ++ EF++    L +V+ +  D  +F+ +V L +F P K+   ALEN 
Sbjct: 7   FVLYEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALENC 66

Query: 279 NAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEAL-EIQCTHTGAVPEI 455
           N++SEG+   DL  FL+  LPK+KK     LG+ D KL  +++EA  +++    G + EI
Sbjct: 67  NSISEGLAHPDLTNFLQKSLPKKKKH--VVLGINDSKLAGSLTEAFPDLKLVFGGVITEI 124

Query: 456 LRGIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDXMIIQ 602
           LRG R HF  L K L   + S AQL LGHSYSR++VKF+VHRVD M+IQ
Sbjct: 125 LRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQ 173


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
           protein W01B11.3 protein.
          Length = 487

 Score = 87.8 bits (208), Expect = 5e-18
 Identities = 50/167 (29%), Positives = 92/167 (55%)
 Frame = +3

Query: 102 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 281
           VLFE +AG+A+F+++  ++L   +  + E  +  ++    + L++F+  K+   A+E  +
Sbjct: 3   VLFEVAAGYAVFKLSNEKKLKN-VDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEATS 61

Query: 282 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 461
            ++EG L + L   L+  + + +K     L V D KLG  I E L + C H  ++ E++R
Sbjct: 62  EITEGKLSKTLKKLLKSSVDETEK-----LAVGDAKLGNLIKEKLSLNCVHDSSINELMR 116

Query: 462 GIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDXMIIQ 602
           G+R H   L+     +  +   L + HS +R +VKFN  ++D MI+Q
Sbjct: 117 GVRAHIEDLL-AEHKEEMNAMNLAVAHSLARYKVKFNPEKIDTMIVQ 162


>AC006827-4|AAF60881.1|  579|Caenorhabditis elegans Hypothetical
           protein Y81B9A.1 protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +2

Query: 368 TRCTGSQARSS-HQRGPGNSVHAYR-SSPGDFERHTL-SLPLAHQRPYPQSMQCGTAWSW 538
           T C G   RS  H RG    V  Y+  S G      L  LP+    P  Q+MQ  TAW +
Sbjct: 31  TYCGGCNTRSHMHPRGECQRVGCYQCGSMGHATAQALCDLPIGGVTPEAQTMQQETAWGF 90


>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
           protein F32A5.2a protein.
          Length = 1000

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 23/93 (24%), Positives = 36/93 (38%)
 Frame = -3

Query: 457 KISGTAPVCVH*ISRASLMAAPSLGSSTPSVHFDRFFLFGRPPSRNRFKSSGRIPSDTAL 278
           K+S T    VH  +R  +  A S GS    V    FF F    + +   S+  IP+ T +
Sbjct: 136 KLSTTHSPIVHKTARPPIRVASSFGSKGKKVTRKFFFFFNSTRTASTVPSTTVIPTTTRI 195

Query: 277 IFSKATIADLCGWKAIKVTTALKRCKSVTDSST 179
             +  T  +         TT      + T ++T
Sbjct: 196 PTTVTTTTETTTTPQSTTTTTTVPPTTTTSTTT 228


>AC026301-5|AAK68894.1|  745|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.3 protein.
          Length = 745

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -2

Query: 263 NDRRLVWLESY*SHNSIKTLQICHGLFDLRQESR*LFKFSNAEQRKA 123
           N ++L W+++      IK L++ H  F++ ++   L  +SN E  KA
Sbjct: 631 NGKQLFWVQNMAFELLIKKLKMHHLKFEMEEQWNFLKNYSNKETDKA 677


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,878,435
Number of Sequences: 27780
Number of extensions: 288835
Number of successful extensions: 679
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)