Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8k08
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L27705-1|AAA61925.1| 297|Drosophila melanogaster succinate dehy... 220 1e-57
AY118923-1|AAM50783.1| 297|Drosophila melanogaster LD23740p pro... 220 1e-57
AE013599-229|AAF57396.1| 297|Drosophila melanogaster CG3283-PA ... 220 1e-57
AY089563-1|AAL90301.1| 437|Drosophila melanogaster RE03249p pro... 201 6e-52
AE014298-2790|AAF48905.2| 437|Drosophila melanogaster CG7349-PA... 201 7e-52
AE014296-584|AAF47730.1| 1381|Drosophila melanogaster CG12734-PA... 32 0.57
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli... 28 9.4
AF132176-1|AAD34764.1| 797|Drosophila melanogaster unknown prot... 28 9.4
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB... 28 9.4
AE014298-759|AAF46049.3| 857|Drosophila melanogaster CG32763-PA... 28 9.4
AE014296-526|AAF47697.2| 420|Drosophila melanogaster CG9969-PA ... 28 9.4
>L27705-1|AAA61925.1| 297|Drosophila melanogaster succinate
dehydrogenase iron-proteinsubunit protein.
Length = 297
Score = 220 bits (537), Expect = 1e-57
Identities = 96/137 (70%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Frame = +1
Query: 232 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 411
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 412 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 591
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 592 QRENEAVKGK-ETQLLQ 639
QR+NEA + K + Q LQ
Sbjct: 165 QRKNEAGEKKGKAQYLQ 181
>AY118923-1|AAM50783.1| 297|Drosophila melanogaster LD23740p
protein.
Length = 297
Score = 220 bits (537), Expect = 1e-57
Identities = 96/137 (70%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Frame = +1
Query: 232 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 411
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 412 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 591
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 592 QRENEAVKGK-ETQLLQ 639
QR+NEA + K + Q LQ
Sbjct: 165 QRKNEAGEKKGKAQYLQ 181
>AE013599-229|AAF57396.1| 297|Drosophila melanogaster CG3283-PA
protein.
Length = 297
Score = 220 bits (537), Expect = 1e-57
Identities = 96/137 (70%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Frame = +1
Query: 232 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 411
++K F +YRWNPD +KPY Q +EVDL +C PMVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 45 QIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPTLTFRRSCREGI 104
Query: 412 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 591
CGSCAMNI G NTLACIS ID N SK K+YPLPHMYVV+DLVPD+ NFY QY++I+PWL
Sbjct: 105 CGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWL 164
Query: 592 QRENEAVKGK-ETQLLQ 639
QR+NEA + K + Q LQ
Sbjct: 165 QRKNEAGEKKGKAQYLQ 181
>AY089563-1|AAL90301.1| 437|Drosophila melanogaster RE03249p
protein.
Length = 437
Score = 201 bits (491), Expect = 6e-52
Identities = 89/137 (64%), Positives = 111/137 (81%)
Frame = +1
Query: 229 KRVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREG 408
+R+KTF +YRW P + +P TQ +EVDL+ C MVLDAL+KIKNE+DPTLTFRRSCREG
Sbjct: 185 QRLKTFEIYRWKPGD---QPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSCREG 241
Query: 409 VCGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPW 588
+CGSCAMNI+G NTLAC+S IDQN SK +IYPLPH+YVV+DLVPD++ FY QY+SI+PW
Sbjct: 242 ICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPW 301
Query: 589 LQRENEAVKGKETQLLQ 639
LQR++ + Q LQ
Sbjct: 302 LQRKDLKREAGTAQYLQ 318
>AE014298-2790|AAF48905.2| 437|Drosophila melanogaster CG7349-PA
protein.
Length = 437
Score = 201 bits (490), Expect = 7e-52
Identities = 89/136 (65%), Positives = 110/136 (80%)
Frame = +1
Query: 232 RVKTFAVYRWNPDEPDKKPYTQNFEVDLDDCAPMVLDALLKIKNEVDPTLTFRRSCREGV 411
R+KTF +YRW P + +P TQ +EVDL+ C MVLDAL+KIKNE+DPTLTFRRSCREG+
Sbjct: 186 RLKTFEIYRWKPGD---QPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSCREGI 242
Query: 412 CGSCAMNIDGVNTLACISHIDQNISKPTKIYPLPHMYVVKDLVPDLTNFYRQYQSIEPWL 591
CGSCAMNI+G NTLAC+S IDQN SK +IYPLPH+YVV+DLVPD++ FY QY+SI+PWL
Sbjct: 243 CGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQPWL 302
Query: 592 QRENEAVKGKETQLLQ 639
QR++ + Q LQ
Sbjct: 303 QRKDLKREAGTAQYLQ 318
>AE014296-584|AAF47730.1| 1381|Drosophila melanogaster CG12734-PA,
isoform A protein.
Length = 1381
Score = 32.3 bits (70), Expect = 0.57
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 419 EPQTPSRHERLKVRVGSTSFLIFSKASNTIGAQSS 315
EPQTP + VG +FL++++ + TIG S+
Sbjct: 1304 EPQTPQKSTENNAPVGPATFLMYNRINTTIGGASN 1338
>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
ring protein protein.
Length = 1092
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 393 FVPRGRLWFLCDEYRRRQHSGLHQPYRSKHFQADEDLSSTSHVRRQRLGPRSDQLL 560
F+ R + D + RR H F +ED ++ SHVR++ +G D LL
Sbjct: 545 FISLKRYCIIIDGWWRRAALEDHLREFIVEFCYEEDANTRSHVRKRNMGMEDDLLL 600
>AF132176-1|AAD34764.1| 797|Drosophila melanogaster unknown
protein.
Length = 797
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 230 NVLRPSQSIDGTPMSPTRNLIRKISKWIWTTAHLWY 337
N RPS+ P + R +R+ + +W H+W+
Sbjct: 34 NGKRPSRKYRRRPKNLMREYVRRQRRHVWLETHIWH 69
>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
isoform B protein.
Length = 1092
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 393 FVPRGRLWFLCDEYRRRQHSGLHQPYRSKHFQADEDLSSTSHVRRQRLGPRSDQLL 560
F+ R + D + RR H F +ED ++ SHVR++ +G D LL
Sbjct: 545 FISLKRYCIIIDGWWRRAALEDHLREFIVEFCYEEDANTRSHVRKRNMGMEDDLLL 600
>AE014298-759|AAF46049.3| 857|Drosophila melanogaster CG32763-PA
protein.
Length = 857
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 230 NVLRPSQSIDGTPMSPTRNLIRKISKWIWTTAHLWY 337
N RPS+ P + R +R+ + +W H+W+
Sbjct: 94 NGKRPSRKYRRRPKNLMREYVRRQRRHVWLETHIWH 129
>AE014296-526|AAF47697.2| 420|Drosophila melanogaster CG9969-PA
protein.
Length = 420
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 385 FRRSCREGVCGSCAMNIDGVNTLACISHI 471
+ +C +CG CA++ DGV + C+ +
Sbjct: 213 YLETCSLYICGMCAVSFDGVFIVLCLHSV 241
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,975,562
Number of Sequences: 53049
Number of extensions: 609680
Number of successful extensions: 1883
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1881
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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