Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8j11
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 56 3e-08
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 47 9e-06
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 47 9e-06
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 47 9e-06
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 47 9e-06
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 45 5e-05
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 44 6e-05
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 44 6e-05
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 39 0.002
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 34 0.088
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 32 0.27
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 32 0.27
AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical ... 32 0.27
AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical ... 31 0.47
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 31 0.82
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 28 5.8
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 28 5.8
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 27 7.7
L10990-7|AAB59174.1| 378|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 63.7 bits (148), Expect = 1e-10
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +2
Query: 173 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 352
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 353 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 493
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 291
Query: 494 PQREATMTNLINKLPNCNHNLLAWLMRHFQHV 589
+R + L KLP N+ L ++M H V
Sbjct: 292 EERVEQLRQLARKLPVHNYETLKFIMLHLNRV 323
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 63.7 bits (148), Expect = 1e-10
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +2
Query: 173 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 352
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 353 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 493
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 520
Query: 494 PQREATMTNLINKLPNCNHNLLAWLMRHFQHV 589
+R + L KLP N+ L ++M H V
Sbjct: 521 EERVEQLRQLARKLPVHNYETLKFIMLHLNRV 552
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 63.7 bits (148), Expect = 1e-10
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +2
Query: 173 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 352
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 353 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 493
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 291
Query: 494 PQREATMTNLINKLPNCNHNLLAWLMRHFQHV 589
+R + L KLP N+ L ++M H V
Sbjct: 292 EERVEQLRQLARKLPVHNYETLKFIMLHLNRV 323
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 63.7 bits (148), Expect = 1e-10
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +2
Query: 173 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 352
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 353 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 493
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 520
Query: 494 PQREATMTNLINKLPNCNHNLLAWLMRHFQHV 589
+R + L KLP N+ L ++M H V
Sbjct: 521 EERVEQLRQLARKLPVHNYETLKFIMLHLNRV 552
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = +2
Query: 170 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 349
P+ GV + S C D +P++V+ + ++ +G+ + IYR + L++
Sbjct: 778 PVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNALKESL 834
Query: 350 TDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAIA-EP 496
++RG + W DV V ++LK F+ +LPE +LT +L+ F A I+
Sbjct: 835 SNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHH 894
Query: 497 QREATMTNLINKLPNCNHNLLAWLMRHFQHV 589
R + NL+ KLP +++ L +L+ H +
Sbjct: 895 NRLHKLRNLLRKLPRPHYDTLRFLIVHLSEI 925
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = +2
Query: 170 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 349
P+ GV + S C D +P++V+ + ++ +G+ + IYR + L++
Sbjct: 656 PVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNALKESL 712
Query: 350 TDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAIA-EP 496
++RG + W DV V ++LK F+ +LPE +LT +L+ F A I+
Sbjct: 713 SNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHH 772
Query: 497 QREATMTNLINKLPNCNHNLLAWLMRHFQHV 589
R + NL+ KLP +++ L +L+ H +
Sbjct: 773 NRLHKLRNLLRKLPRPHYDTLRFLIVHLSEI 803
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical protein
C38D4.5 protein.
Length = 837
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Frame = +2
Query: 170 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLR-KL 346
P+FG L + H+++ +P +R + +++ GL++ IYR + Q++R +
Sbjct: 606 PVFGSTLSAICQ----HENSLVPKFIRVITEVIESKGLETDGIYRVSGNLSAVQKIRCQA 661
Query: 347 FTDRGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQ-REATMTNL 523
D D+ V LK F EL + + LH ++ A + R L
Sbjct: 662 DQDNYKALVSEEDIHVLTGALKLFFRELTDPLFPISLHKEYTSAMQMPNATTRFKKFEEL 721
Query: 524 INKLPNCNHNLLAWLMRHFQHVVS 595
+++LPN N L L+RH V S
Sbjct: 722 LSRLPNENRETLKMLLRHLNRVAS 745
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = +2
Query: 173 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 352
+ G+PL +SV D LP R +ID+++ +GL ++ IYR P K + +L +
Sbjct: 52 VLGLPLTESVSADPSLDGIPLPSFFRYAIDFVEENGLCTEGIYRLSPPKSRLDELERR-A 110
Query: 353 DRGPTFPYHWDVPVACAMLKAFISELPESILTQE 454
+ G + D A ++K F+ ++PE ++ E
Sbjct: 111 NCGEKMIFA-DAHDAAGLIKRFLRQIPEPVVPIE 143
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 47.2 bits (107), Expect = 9e-06
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 125 TMNPFANGFLLXVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY- 301
T+NP NG +FG+ L + V+R R DT P+V+ I ++ G+ +Y
Sbjct: 478 TVNPRLNG--------VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYV 525
Query: 302 ---RTEPDKIKFQQLRK--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHG 463
E K+ +L L T+ + P D V ++K F+ ELPE +++ ++HG
Sbjct: 526 LCGSVEKKKMLRAELESNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHG 582
Query: 464 QFEQATAIAEPQREATMTNLINKLPNC 544
+A ++A P T +L+ K+ +C
Sbjct: 583 MLLEAASVALPNDVQTNRHLVLKIIDC 609
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 47.2 bits (107), Expect = 9e-06
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 125 TMNPFANGFLLXVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY- 301
T+NP NG +FG+ L + V+R R DT P+V+ I ++ G+ +Y
Sbjct: 676 TVNPRLNG--------VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYV 723
Query: 302 ---RTEPDKIKFQQLRK--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHG 463
E K+ +L L T+ + P D V ++K F+ ELPE +++ ++HG
Sbjct: 724 LCGSVEKKKMLRAELESNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHG 780
Query: 464 QFEQATAIAEPQREATMTNLINKLPNC 544
+A ++A P T +L+ K+ +C
Sbjct: 781 MLLEAASVALPNDVQTNRHLVLKIIDC 807
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 47.2 bits (107), Expect = 9e-06
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 125 TMNPFANGFLLXVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY- 301
T+NP NG +FG+ L + V+R R DT P+V+ I ++ G+ +Y
Sbjct: 744 TVNPRLNG--------VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYV 791
Query: 302 ---RTEPDKIKFQQLRK--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHG 463
E K+ +L L T+ + P D V ++K F+ ELPE +++ ++HG
Sbjct: 792 LCGSVEKKKMLRAELESNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHG 848
Query: 464 QFEQATAIAEPQREATMTNLINKLPNC 544
+A ++A P T +L+ K+ +C
Sbjct: 849 MLLEAASVALPNDVQTNRHLVLKIIDC 875
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 47.2 bits (107), Expect = 9e-06
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 125 TMNPFANGFLLXVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY- 301
T+NP NG +FG+ L + V+R R DT P+V+ I ++ G+ +Y
Sbjct: 676 TVNPRLNG--------VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYV 723
Query: 302 ---RTEPDKIKFQQLRK--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHG 463
E K+ +L L T+ + P D V ++K F+ ELPE +++ ++HG
Sbjct: 724 LCGSVEKKKMLRAELESNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHG 780
Query: 464 QFEQATAIAEPQREATMTNLINKLPNC 544
+A ++A P T +L+ K+ +C
Sbjct: 781 MLLEAASVALPNDVQTNRHLVLKIIDC 807
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Frame = +2
Query: 170 PIFGVPLQQ--SVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRK 343
P+FGVPL + S+++ R V+ D+L+ +G+ + I+R + K +++R
Sbjct: 237 PVFGVPLDEHLSIQKERISG------VLTKCCDFLRQNGMNERGIFRVSGNASKIKRIRA 290
Query: 344 LFTDRGPTFP----YHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 511
D G Y+ D + LKA++ ELP+ + L + +A + +R +
Sbjct: 291 AL-DAGQFDADEKHYNNDPHAVASTLKAYLRELPDPLTMDSLQSDWVEAINLEGEERFSA 349
Query: 512 MTNLINKLPNCNHNLLAWLMR 574
+ + K+ + L +LM+
Sbjct: 350 IDRCLKKMTRGHRQNLIYLMK 370
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 403
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 404 MLKAFISELPESILTQELHGQFEQATAIAEPQREAT-MTNLINKLPNCNHNLLAWLMRHF 580
LK+F S LPES++ H +++Q +++ ++ + + + LP N +L +L+ H
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPVSNQKVLQYLVTHL 1280
Query: 581 QHV 589
V
Sbjct: 1281 TKV 1283
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 403
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 404 MLKAFISELPESILTQELHGQFEQATAIAEPQREAT-MTNLINKLPNCNHNLLAWLMRHF 580
LK+F S LPES++ H +++Q +++ ++ + + + LP N +L +L+ H
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPVSNQKVLQYLVTHL 1280
Query: 581 QHV 589
V
Sbjct: 1281 TKV 1283
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Frame = +2
Query: 221 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 376
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 66 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 124
Query: 377 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNL-INKLPNCNHN 553
W+ + +K F+ LPE ++T ELH F A + + + +++LP +
Sbjct: 125 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLR 184
Query: 554 LLAWLMRHFQHV 589
+L ++RH + V
Sbjct: 185 MLEIVVRHLKRV 196
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Frame = +2
Query: 221 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 376
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 377 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNL-INKLPNCNHN 553
W+ + +K F+ LPE ++T ELH F A + + + +++LP +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLR 524
Query: 554 LLAWLMRHFQHV 589
+L ++RH + V
Sbjct: 525 MLEIVVRHLKRV 536
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Frame = +2
Query: 221 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 376
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 377 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNL-INKLPNCNHN 553
W+ + +K F+ LPE ++T ELH F A + + + +++LP +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLR 524
Query: 554 LLAWLMRHFQHV 589
+L ++RH + V
Sbjct: 525 MLEIVVRHLKRV 536
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 44.4 bits (100), Expect = 6e-05
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Frame = +2
Query: 176 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 340
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 48 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 103
Query: 341 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 508
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 104 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 163
Query: 509 TMTNLINKLPNCNHNLLAWLMRHFQHV 589
+ + LP N+ LL +++ V
Sbjct: 164 AVKEFVKLLPRENYILLKTVIKFLTRV 190
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 44.4 bits (100), Expect = 6e-05
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Frame = +2
Query: 176 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 340
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 247 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 302
Query: 341 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 508
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 303 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 362
Query: 509 TMTNLINKLPNCNHNLLAWLMRHFQHV 589
+ + LP N+ LL +++ V
Sbjct: 363 AVKEFVKLLPRENYILLKTVIKFLTRV 389
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Frame = +2
Query: 236 PLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYH-WDVPVACAMLK 412
P + +D+L+ G ++ I+R P + F++L K D+G +H ++ V ++LK
Sbjct: 264 PQPIMTIVDHLRMDGFDAEGIFRKSPKQSTFKEL-KCELDKGVVPDFHKYNTHVLASILK 322
Query: 413 AFISELPESILTQELHGQFE--QATAIAEPQREATMT---NLINKLPNCNHNLLAWLMR 574
++ +P IL L G +E EP E ++ L++ LP + LLA +++
Sbjct: 323 EYLRSIPGKIL---LSGNYELWMREIADEPNTEKKVSCCRALLSHLPTSHSILLANVLK 378
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 33.9 bits (74), Expect = 0.088
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQ-LRKLFTDRGPTFPYHWD---VPVAC 400
+P++V I ++ A+G+K + IYR + + L KL D +P H + V
Sbjct: 585 IPVIVDKCIRFVSAYGMKCEGIYRRNGKVTEAKTILTKLTEDPVGYYPVHENDETVYAVA 644
Query: 401 AMLKAFISELPESILTQELHGQ-FEQATAIAEPQREATMTNLINKLPNCNHNLLAWLMRH 577
+L+ F +L + F+ AT + A LIN + + L L+ H
Sbjct: 645 DVLRQFFRKLDAPLFPSSSQADLFDLATESQSDELCARYAQLINTFELVHRSTLKKLIGH 704
Query: 578 FQHV 589
++V
Sbjct: 705 LKNV 708
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGP-TFPYHWDVPVACAML 409
+P + ++ + + HG+ + I+R E + ++ + +G P + V C M+
Sbjct: 65 VPKFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMV 124
Query: 410 KAFISELPESILTQE 454
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 409
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 410 KAFISELPESILTQE 454
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4b protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 409
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 410 KAFISELPESILTQE 454
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical
protein 2RSSE.1 protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.47
Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Frame = +2
Query: 176 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTD 355
FGVP+ ++ HD +P + + + G KDI+R ++ + ++L ++
Sbjct: 28 FGVPINEAF----AHD---IPATLLMLLLKVNKDGPAKKDIWRAPGNQAQVRKLSQVMQH 80
Query: 356 RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQ-FEQA-TAIAEPQREATMTNLIN 529
++ V A +++K F+S+LP I ++ F A T + ++ +
Sbjct: 81 GRLVNIENFTVYTAASVIKKFLSKLPNGIFGRDNEETLFNSASTGMDIEKQRQVFYRIFG 140
Query: 530 KLPNCNHNLLAWLMRHFQHV 589
LP + +LL L F+ V
Sbjct: 141 SLPVASQHLLVLLFGTFRVV 160
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 30.7 bits (66), Expect = 0.82
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Frame = +2
Query: 101 CFINITVETMNPFANGFLLXVALPIFGVPLQQSVERSRCHDD------TGLPLVVRDSID 262
C + +TV+ P + GF L + I+G+P +++ER++ + T P + +
Sbjct: 86 CRVQVTVQ---PSSTGFRL---VEIYGIP--ENIERAKAYISEVVTRGTRQPGPLCQPVV 137
Query: 263 YLQAHGLKSKDIYRTEPDKIKFQ 331
++Q HG+KS + + +P KI +
Sbjct: 138 HVQTHGIKSPVVDQGDPSKITIE 160
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 27.9 bits (59), Expect = 5.8
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 83 CFVLLFCFINITVETMNPF 139
C+++LF F+N + + PF
Sbjct: 189 CYIILFAFLNFVISVLTPF 207
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1307
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 107 INITVETMNPFANGFLLXVALPIFGVPLQQSVERS 211
I+I E NP N +LL L + VP+ VE S
Sbjct: 873 IDIGDENANPTKNDYLLNARLDSYSVPIAPDVETS 907
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.5 bits (58), Expect = 7.7
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = +2
Query: 233 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRG------PTFPYHWDVPV 394
+P +V + YL +GL ++R + + +QLR G +
Sbjct: 528 VPKIVENCTQYLMTYGLTQVGLFRVAGNTKRCRQLRNALEKVGGGAVINDNMVENTTSHD 587
Query: 395 ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNLINKLPNCNHNLLAWLMR 574
+LK + +LP+S+L E + + A + +R + L L + + L L++
Sbjct: 588 VATLLKEYFRDLPQSLLPGEHYSAYIGAAKLNVDERIEAIRLLFALLVSPILDTLFVLLK 647
Query: 575 HFQHVVS 595
F H VS
Sbjct: 648 -FLHEVS 653
>L10990-7|AAB59174.1| 378|Caenorhabditis elegans Hypothetical
protein C30A5.4 protein.
Length = 378
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Frame = +2
Query: 410 KAFISELPESILTQELHGQFEQATAI-----AEPQREATMTNLINKLPNCNHNLLAWLMR 574
KA + P ++ LHGQF + P+ T + +P C + A R
Sbjct: 151 KALVDIDPPCVVVGNLHGQFNDLINMFILLGRPPETVYVFTECVTSIPKCGEEIWALFQR 210
Query: 575 HFQHV 589
F ++
Sbjct: 211 CFNNL 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,158,357
Number of Sequences: 27780
Number of extensions: 243092
Number of successful extensions: 663
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -