Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8j06
(576 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 26 0.76
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 26 0.76
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 26 0.76
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 25 1.8
AF080563-1|AAC31943.1| 310|Anopheles gambiae Ultrabithorax home... 25 2.3
AF080562-1|AAC31942.1| 327|Anopheles gambiae Ultrabithorax home... 25 2.3
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 3.1
AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding pr... 24 4.1
AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative odorant-b... 24 4.1
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 5.4
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 5.4
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 26.2 bits (55), Expect = 0.76
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 64 NLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVL 225
N+ L+ +P L+ + + EDE++ +DC+ +C V Y + G+ +L
Sbjct: 2348 NIAELVKEPKPLKAIDFCYHD--EDEMVTVLDCITLCVMVVSYSAESTRGYQML 2399
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 26.2 bits (55), Expect = 0.76
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 59 QIT*PLCCTNQMICVWYKHRSLKYLK 136
+I LC T + I +W+++R +K+ K
Sbjct: 276 EIAHALCLTERQIKIWFQNRRMKWKK 301
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 26.2 bits (55), Expect = 0.76
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 59 QIT*PLCCTNQMICVWYKHRSLKYLK 136
+I LC T + I +W+++R +K+ K
Sbjct: 312 EIAHALCLTERQIKIWFQNRRMKWKK 337
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 25.0 bits (52), Expect = 1.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 59 QIT*PLCCTNQMICVWYKHRSLKYLK 136
+I LC T + I +W+++R +K K
Sbjct: 170 EIAHALCLTERQIKIWFQNRRMKLKK 195
>AF080563-1|AAC31943.1| 310|Anopheles gambiae Ultrabithorax
homeotic protein IVa protein.
Length = 310
Score = 24.6 bits (51), Expect = 2.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 74 LCCTNQMICVWYKHRSLKYLK 136
LC T + I +W+++R +K K
Sbjct: 256 LCLTERQIKIWFQNRRMKLKK 276
>AF080562-1|AAC31942.1| 327|Anopheles gambiae Ultrabithorax
homeotic protein IIa protein.
Length = 327
Score = 24.6 bits (51), Expect = 2.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 74 LCCTNQMICVWYKHRSLKYLK 136
LC T + I +W+++R +K K
Sbjct: 273 LCLTERQIKIWFQNRRMKLKK 293
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.2 bits (50), Expect = 3.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 482 PWKKERYWSPSRWAF 526
P KERYWS +R+ F
Sbjct: 1040 PVSKERYWSRNRFHF 1054
>AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding
protein AgamOBP46 protein.
Length = 202
Score = 23.8 bits (49), Expect = 4.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 341 RHGTPGSMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKC 213
+ TP +P FL + TT + CP + S+ST+C
Sbjct: 145 KKATPKGTQVCNPEASFLV--DCIHTTVFSDCPTNLRSTSTEC 185
>AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative
odorant-binding protein OBPjj1 protein.
Length = 199
Score = 23.8 bits (49), Expect = 4.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 341 RHGTPGSMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKC 213
+ TP +P FL + TT + CP + S+ST+C
Sbjct: 142 KKATPKGTQVCNPEASFLV--DCIHTTVFSDCPTNLRSTSTEC 182
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 5.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 210 RTLRAGRTNDHGTRSFRSSGQDRFESQESDS 302
R+ R R GT+ S DR +Q SDS
Sbjct: 513 RSPRLDRKRKTGTKKRNPSSNDRSPNQNSDS 543
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.4 bits (48), Expect = 5.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 353 NSQYRHGTPGSMATRSPTVRFLTFEP 276
NS+ G+P S SPT+R L P
Sbjct: 265 NSKNLTGSPKSQNLSSPTIRSLHISP 290
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,557
Number of Sequences: 2352
Number of extensions: 12964
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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