Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8j06
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...   246   1e-65
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...   230   6e-61
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    95   3e-20
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    79   2e-15
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    72   3e-13
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    52   4e-07
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    48   4e-06
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    48   4e-06
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    47   8e-06
Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    46   2e-05
AF067618-4|AAY44003.1|  381|Caenorhabditis elegans Hypothetical ...    34   0.063
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AC024817-14|AAY86301.1|  354|Caenorhabditis elegans Hypothetical...    27   7.2  

>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score =  246 bits (601), Expect = 1e-65
 Identities = 104/169 (61%), Positives = 138/169 (81%)
 Frame = +1

Query: 52  MATDNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 231
           M+ DNL+A+LY  +DLRL Q PIP+   ++VL+++  VGICGSDVHYW  G  G FV++E
Sbjct: 1   MSQDNLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKE 60

Query: 232 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 411
           PMI+GHE SG+V+++G++VK+L VGDR+A+EPG+PC+ CE CKTGRY+LCP+M F ATPP
Sbjct: 61  PMIVGHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPP 120

Query: 412 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAG 558
           VHG L R+  H ADFCFKLPD+++ E+GAL+EPL+V IHAC+RG V  G
Sbjct: 121 VHGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMG 169


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score =  230 bits (562), Expect = 6e-61
 Identities = 102/169 (60%), Positives = 133/169 (78%)
 Frame = +1

Query: 52  MATDNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 231
           M+ DNL+A+LY  NDLRL Q PI +    +VL++++ VGICGSDVH+   G  G FV++E
Sbjct: 1   MSQDNLSAVLYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKE 60

Query: 232 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 411
           PM++GHE+SGVV++IGS+VK   VGDR+A+EPG+PC+ CE CK GRY+LCPDM F ATPP
Sbjct: 61  PMVLGHESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPP 120

Query: 412 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAG 558
           V+G L R+  H ADFCFKLPD+++ E+GALLEPL+V I AC+RG V  G
Sbjct: 121 VNGALSRFVVHDADFCFKLPDNLSFEDGALLEPLSVAIQACRRGTVQMG 169


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 95.1 bits (226), Expect = 3e-20
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = +1

Query: 97  LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 276
           L + Q PIP+ +EDE+L++M+  GIC SDVH W  G   H+V + PMI GHE +G V  +
Sbjct: 22  LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWL-GDF-HYVSKCPMIGGHEGAGSVISV 79

Query: 277 GSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCP 384
           GSKVKN  +GD+V I+     C  CE+C+TG   LCP
Sbjct: 80  GSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCP 116


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
 Frame = +1

Query: 97  LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 270
           L + Q  +P+  E+E+L++++  GIC SD+H W+    G F      P+I GHE +G V 
Sbjct: 22  LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWE----GDFEYASICPLIGGHEGAGTVV 77

Query: 271 KIGSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLC 381
            IGSKVK   +GDR  I+     C  CE+CKTG   LC
Sbjct: 78  TIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLC 115


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +1

Query: 97  LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 276
           L + Q P+P  ++DE+L++++  GIC SD+H W        V   P++ GHE +G V +I
Sbjct: 21  LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC--PLVGGHEGAGSVVQI 78

Query: 277 GSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLC 381
           G  V    +GD+  ++     C  CEFCK G   LC
Sbjct: 79  GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLC 114


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 28/98 (28%), Positives = 45/98 (45%)
 Frame = +1

Query: 88  PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 267
           P  +  +Q   P+  E  V  ++    +C +D  Y   G     +   P+++GHE SG+V
Sbjct: 22  PLSIETIQVAPPKAHEVRVKFQILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 78

Query: 268 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 381
             +G  V     GD V       C+ CE+CK  + +LC
Sbjct: 79  ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 116


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 28/98 (28%), Positives = 46/98 (46%)
 Frame = +1

Query: 88  PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 267
           P  +  +Q   P+  E  V +++    +C +D  Y   G     +   P+++GHE SG+V
Sbjct: 22  PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76

Query: 268 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 381
             +G  V     GD V       C+ CE+CK  + +LC
Sbjct: 77  ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 114


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 28/98 (28%), Positives = 46/98 (46%)
 Frame = +1

Query: 88  PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 267
           P  +  +Q   P+  E  V +++    +C +D  Y   G     +   P+++GHE SG+V
Sbjct: 22  PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76

Query: 268 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 381
             +G  V     GD V       C+ CE+CK  + +LC
Sbjct: 77  ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 114


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 47.2 bits (107), Expect = 8e-06
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +1

Query: 232 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 381
           P+++GHE SG+V  +G  V     GD V       C+ CE+CK  + ++C
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNMC 287


>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 25/76 (32%), Positives = 42/76 (55%)
 Frame = +1

Query: 88  PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 267
           P+ +  V++ +P + +++VL+R    G+   D  Y + GQ G      P + G + +G V
Sbjct: 21  PDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDT-YIRAGQYGKLP-NLPYVPGKDGAGFV 78

Query: 268 AKIGSKVKNLTVGDRV 315
             +G  VKN+ VGDRV
Sbjct: 79  ELVGESVKNVKVGDRV 94


>AF067618-4|AAY44003.1|  381|Caenorhabditis elegans Hypothetical
           protein F56H1.6 protein.
          Length = 381

 Score = 34.3 bits (75), Expect = 0.063
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
 Frame = +1

Query: 97  LRLVQTPIPEISED-EVLLRMDCVGICGSDVHY-----------WQKGQ-CGHFVLEEPM 237
           + L + P+P I++  +VLL++    +   DV             W+K + C       P+
Sbjct: 29  VELKEVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGREFLGTWKKIESCDAAASRFPL 88

Query: 238 IMGHEASGVVAKIGSKVKNLTVGDRV-AIEPGV-PCRYCEFCKT 363
           I G + + VV  +G  V NL  GD V A+ P + P  + EF  T
Sbjct: 89  IPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVVT 132


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 232 PMIMGHEASGVVAKIGSKVKNLTVGDRV 315
           P + G+E  G V  +GS V ++ VGD V
Sbjct: 76  PAVGGNEGFGKVISVGSNVSSIKVGDHV 103


>Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical
           protein F47G4.2 protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = -1

Query: 324 LYGHSITNCQI-----LDFRTDLGHYS*SFVSHDHWFFQHEVSALTLLPVVDV*PADTHA 160
           LY   I+NC +     +    +L H S   + ++ W+   E+ AL LL V+D+    TH 
Sbjct: 164 LYSLDISNCGVTILTGISRLKNLRHLSLRSLIYESWYDIRELFALKLLNVLDLSMHSTH- 222

Query: 159 VHAQQDL 139
            HA++++
Sbjct: 223 -HARRNM 228


>AC024817-14|AAY86301.1|  354|Caenorhabditis elegans Hypothetical
           protein Y54G2A.45 protein.
          Length = 354

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 346 CEFCKTGRYHLCPDMIFCATP 408
           CE C    YH C D   C TP
Sbjct: 21  CETCLGSGYHYCADSKLCNTP 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,659,190
Number of Sequences: 27780
Number of extensions: 293546
Number of successful extensions: 869
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)