Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8j04
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   244   6e-65
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   244   6e-65
AY071008-1|AAL48630.1|  814|Drosophila melanogaster RE09129p pro...    29   6.8  
AE014134-2208|AAF53197.2|  814|Drosophila melanogaster CG6417-PA...    29   6.8  

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  244 bits (598), Expect = 6e-65
 Identities = 103/179 (57%), Positives = 131/179 (73%)
 Frame = +2

Query: 80  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
           FP  F +G  S+SYQ+EG WN  DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26  FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85

Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
           ++M  EL +  YRFSLSWPR+MP G+ N +S  G KYY+NLID LL   I P+VTI+HW+
Sbjct: 86  VQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWE 145

Query: 440 LPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAP 616
           LPQ LQ+LGGW NP I+  F+DYAR+V  ++ DRVK W ++NEP  +C++ Y    MAP
Sbjct: 146 LPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHGYGVDYMAP 204


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  244 bits (598), Expect = 6e-65
 Identities = 103/179 (57%), Positives = 131/179 (73%)
 Frame = +2

Query: 80  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 259
           FP  F +G  S+SYQ+EG WN  DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26  FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85

Query: 260 IEMATELGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWD 439
           ++M  EL +  YRFSLSWPR+MP G+ N +S  G KYY+NLID LL   I P+VTI+HW+
Sbjct: 86  VQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWE 145

Query: 440 LPQSLQDLGGWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPVSICDYVYNTGGMAP 616
           LPQ LQ+LGGW NP I+  F+DYAR+V  ++ DRVK W ++NEP  +C++ Y    MAP
Sbjct: 146 LPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVKIWTTVNEPWHVCEHGYGVDYMAP 204


>AY071008-1|AAL48630.1|  814|Drosophila melanogaster RE09129p
           protein.
          Length = 814

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 467 GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPV 574
           GW NPLIVDW    + +  ++FA     W  +  P+
Sbjct: 79  GW-NPLIVDWLLVASGLFQAVFALAFAYWADVYHPI 113


>AE014134-2208|AAF53197.2|  814|Drosophila melanogaster CG6417-PA
           protein.
          Length = 814

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 467 GWMNPLIVDWFEDYARVVFSLFADRVKTWVSINEPV 574
           GW NPLIVDW    + +  ++FA     W  +  P+
Sbjct: 79  GW-NPLIVDWLLVASGLFQAVFALAFAYWADVYHPI 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,706,774
Number of Sequences: 53049
Number of extensions: 642585
Number of successful extensions: 1426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)