Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8i24
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical pr...    99   2e-21
Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical p...    51   6e-07
U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protea...    28   4.5  
U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protea...    28   4.5  
U28732-8|AAB04898.1|   92|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z49071-1|CAA88873.2|  269|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U53147-4|AAA96115.1|  668|Caenorhabditis elegans Temporarily ass...    27   7.9  
AL161712-9|CAC70134.1|  343|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical
           protein R07B7.5 protein.
          Length = 461

 Score = 98.7 bits (235), Expect = 2e-21
 Identities = 49/114 (42%), Positives = 75/114 (65%)
 Frame = +2

Query: 167 SLEALFLAKRGHRVRLYEYREDIRNTPQARGRSINLALSIRGRTALREVGLEDHMINNHG 346
           +L A F A++G  V +YE+R+DIR     +GRSINLALS RG++AL  VGL+++++ N G
Sbjct: 14  ALNACFFAQKGWDVSVYEFRKDIRTMKHVQGRSINLALSQRGKSALEAVGLKEYIV-NQG 72

Query: 347 IPMKGRNIHRIDGSTYIIPYDSRTKQCIYSVGRNYLNGLLLQESEKYENVERFF 508
           +P+  R IH  DG TY      +  + I S+ R +LN +++ ++EK  NV+ FF
Sbjct: 73  VPLYARLIHNKDGKTYSRQPYGKPGEHIVSINRRHLNEVMITQAEKSPNVKFFF 126


>Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical
           protein R07B7.4 protein.
          Length = 424

 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = +2

Query: 257 GRSINLALSIRGRTALREVGLEDHMINNHGIPMKGRNIHRID--GSTYIIPYDSRTKQCI 430
           G+SINLAL +R  + ++ +GL++ +I + G+P++ +  H  D  G    +P        I
Sbjct: 4   GKSINLALGVRAMSTMKRIGLKEKVI-HIGVPIRDQIAHFGDTKGKLKRLPV-LNDDDFI 61

Query: 431 YSVGRNYLNGLLLQESEKYENVERFFN 511
            ++ R  L+ +L+ E+EKY NV+  FN
Sbjct: 62  LTINRQELSQILINEAEKYNNVKFHFN 88


>U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protease
           protein 2, isoformb protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 359 GRNIHRIDGSTYIIPYDSRTKQCIYSV 439
           G  ++ ID S  IIP    +  CIY++
Sbjct: 361 GNQVYNIDSSNTIIPLGDGSNNCIYAI 387


>U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protease
           protein 2, isoforma protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 359 GRNIHRIDGSTYIIPYDSRTKQCIYSV 439
           G  ++ ID S  IIP    +  CIY++
Sbjct: 567 GNQVYNIDSSNTIIPLGDGSNNCIYAI 593


>U28732-8|AAB04898.1|   92|Caenorhabditis elegans Hypothetical
           protein F45E1.1 protein.
          Length = 92

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 58  EFETDTRKHRSHSDGEFREW 117
           EFE D +  R ++D  FREW
Sbjct: 8   EFEDDDKDKRDNADAAFREW 27


>Z49071-1|CAA88873.2|  269|Caenorhabditis elegans Hypothetical
           protein T22C8.1 protein.
          Length = 269

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 46  KTSVEFETDTRKHRSHSDGEFREWNVQETRCGCCRWRF 159
           K    F +DT       D    + N ++  CGCC W F
Sbjct: 220 KNISSFLSDTSSTNKVPDRRRIQANTKKLCCGCCAWLF 257


>U53147-4|AAA96115.1|  668|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 117 protein.
          Length = 668

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 244 STGPR*IHKPGFVYTRQNGVERSRFRRPHDQ 336
           ++GP  +   G V+T   G+ER   RRP +Q
Sbjct: 7   TSGPPSVAPRGSVHTNGFGIERGSLRRPPEQ 37


>AL161712-9|CAC70134.1|  343|Caenorhabditis elegans Hypothetical
           protein Y66D12A.12 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = +1

Query: 25  DVACNSLKTSVEFETDTRKHRSHSDGEFREWNVQET-RCGCCRWRF 159
           D  C    T +      R+H        +E N+Q    CGCC W F
Sbjct: 44  DQQCLVCDTKIPHNDTIRRHMQ------KEHNIQRVFTCGCCNWTF 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,199,226
Number of Sequences: 27780
Number of extensions: 258069
Number of successful extensions: 589
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)