Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8i24
         (512 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   3.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.9  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 406 IRNNISGTIDSVDVASFHGD 347
           IRN+   T++SV   + HGD
Sbjct: 239 IRNSTKDTLNSVVQGAIHGD 258


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  DVACNSLKTSVEFETDTRKHRSHSDG 102
           DVA  S+  S     D+R++RS+S G
Sbjct: 682 DVARRSVANSPTKNADSREYRSNSMG 707


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 250 LWSISYVFSIFVQANAMSSLR 188
           +W +   FSI  QA A  SLR
Sbjct: 5   IWWLILYFSIVCQAKAHYSLR 25


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +1

Query: 361 TQHPPNRWFHLYY 399
           T+ PPN W  +++
Sbjct: 157 TRQPPNNWLSVFW 169


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 138 WLLSVEVWWDHSKHY 182
           WL  + +W +HS +Y
Sbjct: 654 WLQVLALWLNHSPNY 668


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,037
Number of Sequences: 438
Number of extensions: 3639
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)