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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8i08
         (394 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical p...    31   0.22 
Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical pr...    31   0.22 
Z81527-9|CAI91172.1|  577|Caenorhabditis elegans Hypothetical pr...    29   0.90 
Z81527-8|CAI91171.1|  537|Caenorhabditis elegans Hypothetical pr...    29   0.90 
Z81527-7|CAI91170.1|  517|Caenorhabditis elegans Hypothetical pr...    29   0.90 
Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical pr...    29   0.90 
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical ...    29   1.6  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    28   2.1  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    28   2.1  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    28   2.1  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    27   3.6  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    27   3.6  
U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical pr...    27   3.6  
U32305-11|AAL50323.1|  663|Caenorhabditis elegans Splicing facto...    27   3.6  
U32305-10|AAM75378.1|  749|Caenorhabditis elegans Splicing facto...    27   3.6  
U32305-9|AAM75380.1|  751|Caenorhabditis elegans Splicing factor...    27   3.6  
U06932-1|AAA64937.1|  749|Caenorhabditis elegans CeSWAP protein.       27   3.6  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      27   3.6  
AF038619-6|AAB92077.2|  442|Caenorhabditis elegans Hypothetical ...    27   3.6  
U88312-1|AAB42351.1|  255|Caenorhabditis elegans Hypothetical pr...    27   4.8  
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr...    27   6.3  
U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein (spl...    27   6.3  
U39850-2|AAA81056.1|  451|Caenorhabditis elegans Hypothetical pr...    27   6.3  
DQ641631-1|ABG29106.1|  451|Caenorhabditis elegans sex determini...    27   6.3  
Z81527-13|CAB04272.2|  343|Caenorhabditis elegans Hypothetical p...    26   8.4  
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    26   8.4  
U39654-3|AAA80406.1|  490|Caenorhabditis elegans Hypothetical pr...    26   8.4  
U39654-2|AAM51505.1|  510|Caenorhabditis elegans Hypothetical pr...    26   8.4  

>Z49911-11|CAA90135.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score = 31.5 bits (68), Expect = 0.22
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 242 RSDRDRDRITVKIRNMKR-SSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           R ++DRDR   + R+ +R S SRD      R+RS   + D       SPE+
Sbjct: 337 RDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEK 387


>Z36948-6|CAA85414.2|  452|Caenorhabditis elegans Hypothetical
           protein D2089.1a protein.
          Length = 452

 Score = 31.5 bits (68), Expect = 0.22
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 242 RSDRDRDRITVKIRNMKR-SSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           R ++DRDR   + R+ +R S SRD      R+RS   + D       SPE+
Sbjct: 337 RDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEK 387


>Z81527-9|CAI91172.1|  577|Caenorhabditis elegans Hypothetical
           protein F35E12.7d protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 163 TENLNLGRTNSYY*VDNYFKIITFTSTLFNVNLKLEALISIKNIDHYMGISQXG 2
           T NL    T +Y  + NY ++I  T T FN  L+ +   +++  D+   + + G
Sbjct: 117 TGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADNDQVVLKYG 170


>Z81527-8|CAI91171.1|  537|Caenorhabditis elegans Hypothetical
           protein F35E12.7c protein.
          Length = 537

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 163 TENLNLGRTNSYY*VDNYFKIITFTSTLFNVNLKLEALISIKNIDHYMGISQXG 2
           T NL    T +Y  + NY ++I  T T FN  L+ +   +++  D+   + + G
Sbjct: 117 TGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADNDQVVLKYG 170


>Z81527-7|CAI91170.1|  517|Caenorhabditis elegans Hypothetical
           protein F35E12.7b protein.
          Length = 517

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 163 TENLNLGRTNSYY*VDNYFKIITFTSTLFNVNLKLEALISIKNIDHYMGISQXG 2
           T NL    T +Y  + NY ++I  T T FN  L+ +   +++  D+   + + G
Sbjct: 117 TGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADNDQVVLKYG 170


>Z81527-6|CAB04275.1|  739|Caenorhabditis elegans Hypothetical
           protein F35E12.7a protein.
          Length = 739

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -1

Query: 163 TENLNLGRTNSYY*VDNYFKIITFTSTLFNVNLKLEALISIKNIDHYMGISQXG 2
           T NL    T +Y  + NY ++I  T T FN  L+ +   +++  D+   + + G
Sbjct: 117 TGNLTFFATYTYIDMTNYQQVIKPTGTYFNATLETDKYFTVQAADNDQVVLKYG 170


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
 Frame = +2

Query: 233 GLPR-SDRDRDRITVKIRNMK-----RSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           GL R +DRDRDR   + R+ +     RS SRD   RS+      GR  D S  R   +R
Sbjct: 76  GLDRGNDRDRDRERERDRDRRRDRRERSGSRDRRRRSRSRDRDGGRRRDRSRSRDRRDR 134


>AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical
           protein F32D1.9 protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 239 PRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           P  DRDRDR   + R      S  +  R  R+RS+ G      D+R   +R
Sbjct: 405 PHRDRDRDRRDRETRRRGERESDRTSSRRHRSRSASGDRRRKRDDREREKR 455


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +2

Query: 251 RDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           RDR R +   R  +RS SRD   R  R+RS+  R   S D R    R
Sbjct: 450 RDRRRYSPDRRERRRSRSRDR--RRHRSRSTSRRRQRSKDRRRDRSR 494



 Score = 26.6 bits (56), Expect = 6.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 245 SDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDD 361
           + R R R   + R+  R  SRD     +RT  ++ R DD
Sbjct: 478 TSRRRQRSKDRRRDRSRDRSRDERNEKRRTSKNVVRQDD 516



 Score = 26.2 bits (55), Expect = 8.4
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +2

Query: 242 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           R +R R R   + R+  RS+SR    RSK  R    R D S DER    R
Sbjct: 459 RRERRRSRSRDRRRHRSRSTSRRRQ-RSKDRRRDRSR-DRSRDERNEKRR 506


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 239  PRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 367
            P+S RDR++   K R   R   RD    SK   S  G  + SS
Sbjct: 1454 PKSSRDREKDREKSREKDRERDRDRREGSKHRDSYHGHRNGSS 1496


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 239  PRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 367
            P+S RDR++   K R   R   RD    SK   S  G  + SS
Sbjct: 1468 PKSSRDREKDREKSREKDRERDRDRREGSKHRDSYHGHRNGSS 1510


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
           protein C47D12.1c protein.
          Length = 4053

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 387 SGLPRSSELSSYLPILLRVRFDRGILSRDELRFILRIFTVIRSL 256
           SGL     L+SYLP +L+      + +R+ L + L +  + RS+
Sbjct: 752 SGLHGDKMLTSYLPEILKQSTVLALTAREPLNYFLLLRALFRSI 795


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical
           protein C47D12.1b protein.
          Length = 4061

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 387 SGLPRSSELSSYLPILLRVRFDRGILSRDELRFILRIFTVIRSL 256
           SGL     L+SYLP +L+      + +R+ L + L +  + RS+
Sbjct: 752 SGLHGDKMLTSYLPEILKQSTVLALTAREPLNYFLLLRALFRSI 795


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical
           protein C47D12.1a protein.
          Length = 4064

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 387 SGLPRSSELSSYLPILLRVRFDRGILSRDELRFILRIFTVIRSL 256
           SGL     L+SYLP +L+      + +R+ L + L +  + RS+
Sbjct: 752 SGLHGDKMLTSYLPEILKQSTVLALTAREPLNYFLLLRALFRSI 795


>U41992-7|AAA83358.1|  374|Caenorhabditis elegans Hypothetical
           protein F32E10.6 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 278 IRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPE 388
           ++  K+S S  S  +SKR  +S    +D  DE+ +P+
Sbjct: 286 VKTPKKSKSSKSPKKSKRAETSDEEDEDEEDEKEAPK 322


>U32305-11|AAL50323.1|  663|Caenorhabditis elegans Splicing factor
           (suppressor ofwhite apricot) related protein 1, isoform
           b protein.
          Length = 663

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 236 LPRSDRDRDRITVKIRNMKRSSSRDSMPRS-----KRTRSSIGRYDDSSDERGSPER 391
           + R+D DR+R   + R+  R  SR   PR      K++R S GR+  S     S +R
Sbjct: 595 MKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKS-GRHHRSRSRSSSRDR 650


>U32305-10|AAM75378.1|  749|Caenorhabditis elegans Splicing factor
           (suppressor ofwhite apricot) related protein 1, isoform
           a protein.
          Length = 749

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 236 LPRSDRDRDRITVKIRNMKRSSSRDSMPRS-----KRTRSSIGRYDDSSDERGSPER 391
           + R+D DR+R   + R+  R  SR   PR      K++R S GR+  S     S +R
Sbjct: 681 MKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKS-GRHHRSRSRSSSRDR 736


>U32305-9|AAM75380.1|  751|Caenorhabditis elegans Splicing factor
           (suppressor ofwhite apricot) related protein 1, isoform
           d protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 236 LPRSDRDRDRITVKIRNMKRSSSRDSMPRS-----KRTRSSIGRYDDSSDERGSPER 391
           + R+D DR+R   + R+  R  SR   PR      K++R S GR+  S     S +R
Sbjct: 683 MKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKS-GRHHRSRSRSSSRDR 738


>U06932-1|AAA64937.1|  749|Caenorhabditis elegans CeSWAP protein.
          Length = 749

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 236 LPRSDRDRDRITVKIRNMKRSSSRDSMPRS-----KRTRSSIGRYDDSSDERGSPER 391
           + R+D DR+R   + R+  R  SR   PR      K++R S GR+  S     S +R
Sbjct: 681 MKRTDEDRERKRHRKRSRSRRRSRSCSPRDRSREHKKSRKS-GRHHRSRSRSSSRDR 736


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 387 SGLPRSSELSSYLPILLRVRFDRGILSRDELRFILRIFTVIRSL 256
           SGL     L+SYLP +L+      + +R+ L + L +  + RS+
Sbjct: 752 SGLHGDKMLTSYLPEILKQSTVLALTAREPLNYFLLLRALFRSI 795


>AF038619-6|AAB92077.2|  442|Caenorhabditis elegans Hypothetical
           protein F56A11.6 protein.
          Length = 442

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = +2

Query: 242 RSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           RSD+DR R      +  R  SR       R RS   R D S  +R   ER
Sbjct: 303 RSDKDRSRSRKDREDRDRERSRKDREDRDRERSRKEREDRSRKDREDRER 352


>U88312-1|AAB42351.1|  255|Caenorhabditis elegans Hypothetical
           protein F25F6.1 protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 4.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 281 RNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERG 379
           RNM       SMPRSKR+ S   + DDS +  G
Sbjct: 161 RNMFGLPRHMSMPRSKRSASEPVQEDDSKNTSG 193


>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
           protein T01E8.5 protein.
          Length = 1270

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = +2

Query: 233 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 367
           G  RS     +   K R  KRSSSR S     R RSS  R D SS
Sbjct: 162 GRQRSRSREKKRRKKERRRKRSSSRSSSSSRSRDRSSRAR-DTSS 205


>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
           protein T01E8.5 protein.
          Length = 1270

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = +2

Query: 233 GLPRSDRDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSS 367
           G  RS     +   K R  KRSSSR S     R RSS  R D SS
Sbjct: 162 GRQRSRSREKKRRKKERRRKRSSSRSSSSSRSRDRSSRAR-DTSS 205


>U41007-8|AAA82270.1|  179|Caenorhabditis elegans Sr protein
           (splicing factor) protein6, isoform a protein.
          Length = 179

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 DRDRDRITVKIRNMKRSSSRDSMPRSKRTRS 340
           DR RDR   + R+  R  SR+     +RTRS
Sbjct: 118 DRSRDRSRDRSRDRSRDRSRERSRERERTRS 148


>U39850-2|AAA81056.1|  451|Caenorhabditis elegans Hypothetical
           protein F52C9.7 protein.
          Length = 451

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 257 RDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           +  +T K    K   S+    + K+ RSS    D+SSDER   +R
Sbjct: 111 KSMMTSKAEKSKEKKSKKDKKKKKKKRSSSSS-DESSDERVERKR 154


>DQ641631-1|ABG29106.1|  451|Caenorhabditis elegans sex determining
           protein MOG-3 protein.
          Length = 451

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 257 RDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGSPER 391
           +  +T K    K   S+    + K+ RSS    D+SSDER   +R
Sbjct: 111 KSMMTSKAEKSKEKKSKKDKKKKKKKRSSSSS-DESSDERVERKR 154


>Z81527-13|CAB04272.2|  343|Caenorhabditis elegans Hypothetical
           protein F35E12.5 protein.
          Length = 343

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 157 NLNLGRTNSYY*VDNYFKIITFTSTLFNVNLKLEALISIK 38
           +L    T +Y  + NY ++I  T T FN  L+     +++
Sbjct: 114 SLKFFATYTYVDISNYQQVIKATGTFFNTTLEANKFTTVR 153


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 59 protein.
          Length = 1592

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 251  RDRDRITVKIRNMKRSSSRDSMPRSKRTRSSIGRYDDSSDERGS 382
            +D+D I V +     S+    + R K T  +IG+ D S+ ER S
Sbjct: 1497 QDQDSIEVPVNLASGSTDGRKVTRRKFTFRTIGKDDRSASERRS 1540


>U39654-3|AAA80406.1|  490|Caenorhabditis elegans Hypothetical
           protein C56G3.1a protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -1

Query: 235 SNHESSLRRTTIPNELQTLITQQITENLNLGRTNS-YY*VDNYFKIITFTSTLFNVNLKL 59
           +NH SSLR  ++P+ +++ IT++   N    RT S    +   +  + F  TL    +  
Sbjct: 296 NNHTSSLRSPSMPS-IRSSITERNKTNQRTNRTTSLLIAMAGSYAALWFPFTLITFLIDF 354

Query: 58  EALIS 44
           E +I+
Sbjct: 355 ELIIN 359


>U39654-2|AAM51505.1|  510|Caenorhabditis elegans Hypothetical
           protein C56G3.1b protein.
          Length = 510

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -1

Query: 235 SNHESSLRRTTIPNELQTLITQQITENLNLGRTNS-YY*VDNYFKIITFTSTLFNVNLKL 59
           +NH SSLR  ++P+ +++ IT++   N    RT S    +   +  + F  TL    +  
Sbjct: 316 NNHTSSLRSPSMPS-IRSSITERNKTNQRTNRTTSLLIAMAGSYAALWFPFTLITFLIDF 374

Query: 58  EALIS 44
           E +I+
Sbjct: 375 ELIIN 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,565,225
Number of Sequences: 27780
Number of extensions: 124615
Number of successful extensions: 453
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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