Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8i07
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-3|CAA78049.1| 570|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 30 1.3
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 30 1.3
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 2.9
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z12017-3|CAA78049.1| 570|Caenorhabditis elegans Hypothetical
protein R08D7.3 protein.
Length = 570
Score = 73.7 bits (173), Expect = 1e-13
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Frame = +2
Query: 167 IQDNPTGWGPYEMPDQFRD-MPYQPFSKGDRLGKISDWTMVQ------DKKYQNK-YASQ 322
+ DN GWGP + +P+Q F+K DR+G+++DW V +++Y + Y S
Sbjct: 11 LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSA 70
Query: 323 FGAGSSYAYFHDEDESTFHLVDTTR--VQKPYQSYQXXXXXXXXXXXXXXXXXXXXMTTL 496
AGS + Y H DE F LVDT++ + P ++++ +
Sbjct: 71 ANAGSQFDYIHGMDEHNFQLVDTSKPMARNPQRNFRVRQMHLRKMMQKENEKREMVNQST 130
Query: 497 NKPRERKLGK----------------RWGQRGA-------PMKIRDASVTVRPTWVTIED 607
N +R + K R GQRG K R SV VRP WV +E+
Sbjct: 131 NLRMKRSIAKEQQRAFKMWQRRGGNARQGQRGQGGRFGGDRPKERLPSVQVRPEWVVLEE 190
Query: 608 MDFPRLAKLSLPGI 649
M+ +KL+LP I
Sbjct: 191 MNLSAFSKLALPNI 204
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/76 (21%), Positives = 31/76 (40%)
Frame = -3
Query: 388 VHQVKGAFIFIMEVCIRRTSAEL*CIXXXXXXXLHHCPITYLA*SIAFAEWLIGHVPKLV 209
+H F+F E + S E+ I ++ I +++ + W + PKL+
Sbjct: 68 IHSYNSGFVFFTEPHLSLVSNEIMKIGLVFFCGIYGSTICFISVQFLYRYWALFDAPKLI 127
Query: 208 WHLVRSPTGWIILYYG 161
W + W+I +G
Sbjct: 128 WFEGWMMSAWLIYSFG 143
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/76 (21%), Positives = 31/76 (40%)
Frame = -3
Query: 388 VHQVKGAFIFIMEVCIRRTSAEL*CIXXXXXXXLHHCPITYLA*SIAFAEWLIGHVPKLV 209
+H F+F E + S E+ I ++ I +++ + W + PKL+
Sbjct: 82 IHSYNSGFVFFTEPHLSLVSNEIMKIGLVFFCGIYGSTICFISVQFLYRYWALFDAPKLI 141
Query: 208 WHLVRSPTGWIILYYG 161
W + W+I +G
Sbjct: 142 WFEGWMMSAWLIYSFG 157
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical protein
T24F1.6a protein.
Length = 1067
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 440 LEPAHADMTGTAFVLE*CPPGERCF--HLHHG-SMHKTNQ-RRTVMHTCSGTSCLAPLSN 273
L A MTG + P ERCF H+ +++ T Q + T M TCS + L P+ +
Sbjct: 923 LVDAQPSMTGNTCTFQKIKPFERCFMKFFHYRMTLNITKQLQLTGMSTCSRYAKLYPVPH 982
Query: 272 HLSCLIDRLC*MADRAC 222
LI +ADRAC
Sbjct: 983 TTLSLI-----IADRAC 994
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical protein
T24F1.6b protein.
Length = 1067
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 440 LEPAHADMTGTAFVLE*CPPGERCF--HLHHG-SMHKTNQ-RRTVMHTCSGTSCLAPLSN 273
L A MTG + P ERCF H+ +++ T Q + T M TCS + L P+ +
Sbjct: 923 LVDAQPSMTGNTCTFQKIKPFERCFMKFFHYRMTLNITKQLQLTGMSTCSRYAKLYPVPH 982
Query: 272 HLSCLIDRLC*MADRAC 222
LI +ADRAC
Sbjct: 983 TTLSLI-----IADRAC 994
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 440 LEPAHADMTGTAFVLE*CPPGERCF--HLHHG-SMHKTNQ-RRTVMHTCSGTSCLAPLSN 273
L A MTG + P ERCF H+ +++ T Q + T M TCS + L P+ +
Sbjct: 923 LVDAQPSMTGNTCTFQKIKPFERCFMKFFHYRMTLNITKQLQLTGMSTCSRYAKLYPVPH 982
Query: 272 HLSCLIDRLC*MADRAC 222
LI +ADRAC
Sbjct: 983 TTLSLI-----IADRAC 994
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 440 LEPAHADMTGTAFVLE*CPPGERCF--HLHHG-SMHKTNQ-RRTVMHTCSGTSCLAPLSN 273
L A MTG + P ERCF H+ +++ T Q + T M TCS + L P+ +
Sbjct: 923 LVDAQPSMTGNTCTFQKIKPFERCFMKFFHYRMTLNITKQLQLTGMSTCSRYAKLYPVPH 982
Query: 272 HLSCLIDRLC*MADRAC 222
LI +ADRAC
Sbjct: 983 TTLSLI-----IADRAC 994
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = -2
Query: 389 CPPGERCFHLHHGSMHKTN---QRRTVMHTC-SGTSCLAPLSNHLSCLIDRLC*MADRAC 222
CP G C K N Q R V++ C +G ++ + N SC D C + C
Sbjct: 657 CPQGSVCVMSSIQCYQKGNCVPQPRCVLNFCPAGEPYISSIGNAESCTKDEECPTSTHWC 716
Query: 221 P*IGLAS 201
+GLAS
Sbjct: 717 HKLGLAS 723
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +2
Query: 107 TAMSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQP 238
T S+ V+ P+ + P + P +PD+ D P +P
Sbjct: 534 TTTSDPVVQTNPPVVIVDPATSEEPLSTASTALPDETTDAPEEP 577
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -2
Query: 389 CPPGERCFHLHHGSMHKTNQRRTVMHTCSGTSCLAPLSNHLSCLI 255
CP G+RC +H + R ++ S LA L +H+ I
Sbjct: 187 CPYGKRCLFIHPDNQPNAYIRADKLYEVSQRHALADLRDHVESQI 231
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 191 PNRLDYPVLWVK*TSSALRPAVRVPTSQFTMLSYNLKPLTTR 66
P PV++ + PA T+QFT S+ P+TT+
Sbjct: 561 PQTSPIPVIYPVPVAGQNTPAPSTQTNQFTQQSFETSPMTTQ 602
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 191 PNRLDYPVLWVK*TSSALRPAVRVPTSQFTMLSYNLKPLTTR 66
P PV++ + PA T+QFT S+ P+TT+
Sbjct: 556 PQTSPIPVIYPVPVAGQNTPAPSTQTNQFTQQSFETSPMTTQ 597
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 191 PNRLDYPVLWVK*TSSALRPAVRVPTSQFTMLSYNLKPLTTR 66
P PV++ + PA T+QFT S+ P+TT+
Sbjct: 579 PQTSPIPVIYPVPVAGQNTPAPSTQTNQFTQQSFETSPMTTQ 620
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,937,473
Number of Sequences: 27780
Number of extensions: 349408
Number of successful extensions: 787
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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