Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8h07
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p pro...    32   0.69 
AY075330-1|AAL68197.1|  867|Drosophila melanogaster GH11924p pro...    28   8.4  
AE013599-1633|AAF58426.1|  867|Drosophila melanogaster CG13326-P...    28   8.4  

>BT030421-1|ABO52841.1|  491|Drosophila melanogaster IP17579p
           protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 304 EQNCEDSKVYINKTTGYFLCSKCNLHGDWTILE 402
           + NC+ S VY+ ++  Y + S C+   DW  LE
Sbjct: 361 DSNCQVSVVYMGRSQNYSVISLCSKEEDWKCLE 393


>AY075330-1|AAL68197.1|  867|Drosophila melanogaster GH11924p
           protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +1

Query: 22  SIKLFLFLLAHNVKTAITNFEMLHSIRINRYINSF 126
           S+K  L  L++ VKT++TNF +L + R N +I+++
Sbjct: 525 SMKRALKSLSNLVKTSVTNF-ILQTTRFNEFIDAY 558


>AE013599-1633|AAF58426.1|  867|Drosophila melanogaster CG13326-PA
           protein.
          Length = 867

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +1

Query: 22  SIKLFLFLLAHNVKTAITNFEMLHSIRINRYINSF 126
           S+K  L  L++ VKT++TNF +L + R N +I+++
Sbjct: 525 SMKRALKSLSNLVKTSVTNF-ILQTTRFNEFIDAY 558


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,835,937
Number of Sequences: 53049
Number of extensions: 430915
Number of successful extensions: 1313
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)