Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8h07
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81077-4|CAB03071.3|  618|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U40029-10|AAN65326.1|  644|Caenorhabditis elegans Hypothetical p...    27   7.7  
U40029-9|AAN65325.1|  727|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical...    27   7.7  
AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical...    27   7.7  

>AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical
           protein ZK488.6 protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
 Frame = +1

Query: 388 WTIL----ERIVKKAKVEVSIKDYIDKLQNDTAS---FKNEWENVIKDTMSMSAL-NETE 543
           WT L    ER+  K+    ++ DY+D +Q+D+ S   F+ +W  V+K   + +   NET+
Sbjct: 344 WTALIDIDERLEMKSDKFKTVVDYLDSIQDDSISSLRFRVKW--VMKHNYTPARYENETQ 401

Query: 544 LLDLFRLYEFPFHSEAGK 597
           L      +++   S+ G+
Sbjct: 402 LQSEMIFHKYQNTSQLGR 419


>Z81077-4|CAB03071.3|  618|Caenorhabditis elegans Hypothetical
           protein F36A2.4 protein.
          Length = 618

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +1

Query: 418 AKVEVSIKDYIDKLQNDTASFKNEWENV 501
           AK+E + KDY+DKL +     +++++NV
Sbjct: 53  AKIEQNAKDYVDKLWSVAKRDRDKYKNV 80


>U40029-10|AAN65326.1|  644|Caenorhabditis elegans Hypothetical
           protein F10G7.9b protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/64 (26%), Positives = 36/64 (56%)
 Frame = +1

Query: 400 ERIVKKAKVEVSIKDYIDKLQNDTASFKNEWENVIKDTMSMSALNETELLDLFRLYEFPF 579
           E +V+K + +V +++  D++QN++   ++E+E V  +    + LN T  L L  +   P 
Sbjct: 436 EVVVEKKETDVVVENKNDEIQNESVEGEDEYEEV--EEPPSTPLNPTPDLILNDVVSDPI 493

Query: 580 HSEA 591
            ++A
Sbjct: 494 VNQA 497


>U40029-9|AAN65325.1|  727|Caenorhabditis elegans Hypothetical
           protein F10G7.9a protein.
          Length = 727

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/64 (26%), Positives = 36/64 (56%)
 Frame = +1

Query: 400 ERIVKKAKVEVSIKDYIDKLQNDTASFKNEWENVIKDTMSMSALNETELLDLFRLYEFPF 579
           E +V+K + +V +++  D++QN++   ++E+E V  +    + LN T  L L  +   P 
Sbjct: 519 EVVVEKKETDVVVENKNDEIQNESVEGEDEYEEV--EEPPSTPLNPTPDLILNDVVSDPI 576

Query: 580 HSEA 591
            ++A
Sbjct: 577 VNQA 580


>AC087079-18|AAK27867.2|  830|Caenorhabditis elegans Hypothetical
           protein Y37E3.17a protein.
          Length = 830

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 373 NLHGDWTILERIVKKAKVEVSIKDYIDKLQNDTA--SFKNEWENVIKDTMSMSALNETEL 546
           +++ +W+  +R   +    +S      +L+ D A  SF+N WE  + ++ +M   NE  L
Sbjct: 428 SMYYNWSYTDRSAGRPTDRIS--GVYGRLKKDGASFSFRNGWE--VANSFNMGVQNEEYL 483

Query: 547 LDLFRLYE 570
             L R YE
Sbjct: 484 PTLIREYE 491


>AC087079-17|AAT81177.1|  837|Caenorhabditis elegans Hypothetical
           protein Y37E3.17b protein.
          Length = 837

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 373 NLHGDWTILERIVKKAKVEVSIKDYIDKLQNDTA--SFKNEWENVIKDTMSMSALNETEL 546
           +++ +W+  +R   +    +S      +L+ D A  SF+N WE  + ++ +M   NE  L
Sbjct: 435 SMYYNWSYTDRSAGRPTDRIS--GVYGRLKKDGASFSFRNGWE--VANSFNMGVQNEEYL 490

Query: 547 LDLFRLYE 570
             L R YE
Sbjct: 491 PTLIREYE 498


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,037,092
Number of Sequences: 27780
Number of extensions: 248888
Number of successful extensions: 746
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)