Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8h07
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 25 0.43
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 25 0.43
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 0.99
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 0.99
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 4.0
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 7.0
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 7.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.2
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.43
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 406 IVKKAKVEVSIKDYIDKLQNDTASFKNEWENVIKDTMSMSALNETELLDL 555
++KK K +S+ I Q S N W ++ MSMS++ LD+
Sbjct: 1 MMKKEKPMMSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDM 50
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.43
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 406 IVKKAKVEVSIKDYIDKLQNDTASFKNEWENVIKDTMSMSALNETELLDL 555
++KK K +S+ I Q S N W ++ MSMS++ LD+
Sbjct: 1 MMKKEKPMMSVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDM 50
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.2 bits (50), Expect = 0.99
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/41 (24%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 EMLHSIRINRYINSFKSITSRNDWNCYQKQIHNIG-LQDIP 201
+++ S+ N +++ + + N++N Y+K +NI ++ IP
Sbjct: 80 KIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 313 CEDSKVYINKTTGYFLCSKCNLHGD 387
C VY +T G C C LH D
Sbjct: 527 CGQLDVYKVETIGDAYCVACGLHRD 551
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 304 EQNCEDSKVYINKTTGYFL 360
E C+D+ YI TG+ L
Sbjct: 190 EDKCKDTFAYIADVTGFAL 208
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 310 NCEDSKVYINKTTGYFL 360
NC+++ YI+ +GY L
Sbjct: 183 NCDNTYAYISDLSGYAL 199
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 370 CNLHGDWTILERIVKKAKVEVS 435
C +HGD + +K K+E++
Sbjct: 829 CEVHGDTPVTVTWLKGGKIELN 850
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 370 CNLHGDWTILERIVKKAKVEVS 435
C +HGD + +K K+E++
Sbjct: 825 CEVHGDTPVTVTWLKGGKIELN 846
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,931
Number of Sequences: 438
Number of extensions: 3189
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -