Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8h05
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 182 1e-46
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 72 2e-13
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 72 2e-13
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 72 2e-13
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 58 4e-09
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 37 0.011
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 36 0.014
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 33 0.18
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 31 0.54
AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical... 31 0.72
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 29 1.7
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 29 2.9
Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical p... 28 3.8
Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical pr... 28 3.8
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 28 3.8
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 28 3.8
AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical ... 28 3.8
Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 27 6.7
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 6.7
AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical... 27 6.7
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 27 8.8
AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of... 27 8.8
AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 182 bits (443), Expect = 1e-46
Identities = 89/140 (63%), Positives = 103/140 (73%)
Frame = +3
Query: 120 FRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLN 299
F ++ R Y+ T DADLVVIG GPGGYVAAIKAAQLGMK V VEK+ TLGGTCLN
Sbjct: 11 FAKRQFFQVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVEKNATLGGTCLN 70
Query: 300 VGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQ 479
VGCIPSKALL+NSH HMA+HDF RGI+ + + KMME K+N+VK LTGGI LF+
Sbjct: 71 VGCIPSKALLNNSHYLHMAQHDFAARGIDC-TASLNLPKMMEAKSNSVKQLTGGIKQLFK 129
Query: 480 KNKVNLVKGVGTIVAPNKVE 539
NKV V+G TIV PN V+
Sbjct: 130 ANKVGHVEGFATIVGPNTVQ 149
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 72.1 bits (169), Expect = 2e-13
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Frame = +3
Query: 153 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS---VEKDPT-----LGGTCLNVGC 308
+++ H DL+VIG G GG AA +A++LG KV V+ P LGGTC+NVGC
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGC 224
Query: 309 IPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 482
IP K L+H + L + HD K+ G + G+V + + + + + L G + ++
Sbjct: 225 IPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLRE 283
Query: 483 NKVNLVKGVGTIVAPNKV 536
V + G P ++
Sbjct: 284 KTVTYINSYGEFTGPFEI 301
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 72.1 bits (169), Expect = 2e-13
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Frame = +3
Query: 153 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS---VEKDPT-----LGGTCLNVGC 308
+++ H DL+VIG G GG AA +A++LG KV V+ P LGGTC+NVGC
Sbjct: 23 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGC 82
Query: 309 IPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 482
IP K L+H + L + HD K+ G + G+V + + + + + L G + ++
Sbjct: 83 IPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLRE 141
Query: 483 NKVNLVKGVGTIVAPNKV 536
V + G P ++
Sbjct: 142 KTVTYINSYGEFTGPFEI 159
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 72.1 bits (169), Expect = 2e-13
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Frame = +3
Query: 153 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVS---VEKDPT-----LGGTCLNVGC 308
+++ H DL+VIG G GG AA +A++LG KV V+ P LGGTC+NVGC
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGC 224
Query: 309 IPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 482
IP K L+H + L + HD K+ G + G+V + + + + + L G + ++
Sbjct: 225 IPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLRE 283
Query: 483 NKVNLVKGVGTIVAPNKV 536
V + G P ++
Sbjct: 284 KTVTYINSYGEFTGPFEI 301
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 67.7 bits (158), Expect = 5e-12
Identities = 39/122 (31%), Positives = 62/122 (50%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 359
D +VIG G GG +A +A + G+ V +E LGGTC+NVGC+P K +++N L+
Sbjct: 8 DYLVIGGGSGGIASARRAREFGVSVGLIESG-RLGGTCVNVGCVPKK-VMYNCSLHAEFI 65
Query: 360 HDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVE 539
D G + FD+K + + + +K L G + + V ++G T VE
Sbjct: 66 RDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNGLYESGLKGSSVEYIRGRATFAEDGTVE 125
Query: 540 VH 545
V+
Sbjct: 126 VN 127
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 67.7 bits (158), Expect = 5e-12
Identities = 39/122 (31%), Positives = 62/122 (50%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 359
D +VIG G GG +A +A + G+ V +E LGGTC+NVGC+P K +++N L+
Sbjct: 22 DYLVIGGGSGGIASARRAREFGVSVGLIESG-RLGGTCVNVGCVPKK-VMYNCSLHAEFI 79
Query: 360 HDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVE 539
D G + FD+K + + + +K L G + + V ++G T VE
Sbjct: 80 RDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNGLYESGLKGSSVEYIRGRATFAEDGTVE 139
Query: 540 VH 545
V+
Sbjct: 140 VN 141
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 58.0 bits (134), Expect = 4e-09
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Frame = +3
Query: 153 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK-DPT-------LGGTCLNVGC 308
R+ +++ DL+VIG+G GG + +AA LG V ++ +PT +GGTC NVGC
Sbjct: 13 RRLFSSNKFDLIVIGAGSGGLSCSKRAADLGANVALIDAVEPTPHGHSWGIGGTCANVGC 72
Query: 309 IPSKALLHNSHLYHMAKHDFKQ--RGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQK 482
IP K + + + KH K GI+ ++ D+ + + + VK + +
Sbjct: 73 IPKKLMHQAAIVGKELKHADKYGWNGIDQEKIKHDWNVLSKNVNDRVKANNWIYRVQLNQ 132
Query: 483 NKVNLVKGVGTIVAPNKVEV 542
K+N V +K+ +
Sbjct: 133 KKINYFNAYAEFVDKDKIVI 152
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLG------MKVVSVEKDPTLGGTCLNVGCIPSKAL 326
D+V++G GP G AAI+ QL ++V VEK +GG L+ I ++AL
Sbjct: 52 DVVIVGGGPSGLSAAIRLRQLAEKAQKELRVCVVEKASVIGGHTLSGAVIETRAL 106
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 36.3 bits (80), Expect = 0.014
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 153 RQYATT-HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP--TLGGTCLNVGCIPSKA 323
R Y T +AD+VV G G G A A+ G KV VEKD G T L+ G + S
Sbjct: 13 RSYTTAVANADVVVCGGGISGTSIAYHLAKRGKKVALVEKDSIGCSGATGLSAGLVSSPI 72
Query: 324 LLHNSHLYHMAK 359
++ L +A+
Sbjct: 73 FWQDTSLQAIAQ 84
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAK 359
D ++IG G G AA + G KV +E+ +GG + +P S+L + +
Sbjct: 16 DAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVTEEIVPGFRFSRASYLLSLLR 75
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 31.5 bits (68), Expect = 0.41
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 141 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSK 320
R+ R + T D D++VIG G G +A AA+ G V V ++ G + C PS
Sbjct: 7 RLLRRCFQT--DVDVIVIGGGHAGCESAAAAARCGSNTVLVTQNKNTIG---EMSCNPSF 61
Query: 321 ALLHNSHL 344
+ HL
Sbjct: 62 GGIGKGHL 69
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 183 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 287
+ +IGSGP G AA + ++G VV E+ +GG
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 183 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 287
+ +IGSGP G AA + ++G VV E+ +GG
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYERKNRVGG 1883
>AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical
protein Y77E11A.2 protein.
Length = 370
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 102 KLASPTFRSGSLVRIATRQYATTH--DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDP 275
++ S ++G ++ TR+ + +ADLV+ G G ++AA ++ + DP
Sbjct: 87 EIVSELGKAGISTKVVTREQLAQYLPEADLVISAGGDGTFLAAASVVNDNTPIIGINTDP 146
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 448 PLTALALYSIIFLKSNV 398
P+ LALYS+IF+KSNV
Sbjct: 24 PIYCLALYSLIFIKSNV 40
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 174 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPT 278
D +++VIG+GP G +++ ++ K+ + K T
Sbjct: 170 DKEVIVIGAGPSGIDISLQLSETAKKITLISKKAT 204
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 189 VIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDF 368
VIG+G G AA + G++V E+ +GGT + S + ++ + ++ K
Sbjct: 7 VIGAGAAGLAAAKHSLAQGLEVEVFEQTGNVGGTWVYSKQTGSHSSMYQNMTTNLPKEVM 66
Query: 369 KQRGI 383
+ RG+
Sbjct: 67 QFRGV 71
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 265 STETTFMPSWAALIAATYPPGPEPITTRSA 176
ST T +P+ A+ T PP P P T+ S+
Sbjct: 624 STPTASIPAATAITTTTAPPKPSPTTSESS 653
>Z73906-16|CAA98123.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 290
D+++IG G G A+ A G+K VE D GT
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGT 112
>Z72516-4|CAA96690.1| 722|Caenorhabditis elegans Hypothetical
protein T25G3.4 protein.
Length = 722
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 290
D+++IG G G A+ A G+K VE D GT
Sbjct: 76 DVLIIGGGATGAGVALDAQTRGLKTALVELDDFSSGT 112
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 HMAKHDFKQRGIETGEVTFDFKKMME 425
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 171 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 269
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEGGLKTAVITK 73
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 171 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 269
H D VV+G+G G AA+ A+ G+K + K
Sbjct: 41 HAYDAVVVGAGGAGLRAAMGLAEEGLKTAVITK 73
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 348 HMAKHDFKQRGIETGEVTFDFKKMME 425
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
>AF043693-6|AAB97539.1| 640|Caenorhabditis elegans Hypothetical
protein C34B2.7 protein.
Length = 640
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 171 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVEK 269
H D VV+G+G G AA+ ++ GMK + K
Sbjct: 34 HTFDAVVVGAGGAGLRAAMGLSEGGMKTAVITK 66
>Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical
protein F44D12.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 273 PTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMM 422
PTL G C + AL H ++ Y K + + R I G + KKM+
Sbjct: 77 PTLPGGCNDENAAKEAALRHKTNQY-FPKWEIQTRRITNGTTKEEMKKMV 125
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 183 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 287
+VVIG+G G AA + G V VE GG
Sbjct: 177 VVVIGAGAAGIAAATQLLTFGFDVAVVEASGLTGG 211
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 337 ELCSKAFDGIHPTLRQVPPKVGSFSTETTFMPSWAALIAATYPPGPEPITTRSASCVV 164
E + A DG+ PT P+V + S +T + I +T P EP+ T + S V
Sbjct: 1283 ESSTSAPDGVSPTSSATAPEVPTTSASSTPDAVEESGIPSTSKPTAEPLETTAPSTEV 1340
>AL117200-15|CAB55049.2| 609|Caenorhabditis elegans Hypothetical
protein Y50E8A.6 protein.
Length = 609
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 180 DLVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 290
D++VIG G G A+ A G+K VE GT
Sbjct: 64 DVLVIGGGSAGAGVALDAQTRGLKTAMVEYGDYCSGT 100
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 183 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGGT 290
+ +IG+G G V+A A + G +V E+ +GGT
Sbjct: 5 ICIIGAGAAGLVSAKHAIKQGYQVDIFEQTDQVGGT 40
>AY152852-1|AAN62580.1| 770|Caenorhabditis elegans suppressor of
presenilin 5 protein.
Length = 770
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 183 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 287
++VIG+G G AA + G V+ +E +GG
Sbjct: 137 VIVIGAGAAGISAATQLESFGFDVIVLEARNCIGG 171
>AL032636-3|CAA21604.1| 770|Caenorhabditis elegans Hypothetical
protein Y40B1B.6 protein.
Length = 770
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 183 LVVIGSGPGGYVAAIKAAQLGMKVVSVEKDPTLGG 287
++VIG+G G AA + G V+ +E +GG
Sbjct: 137 VIVIGAGAAGISAATQLESFGFDVIVLEARNCIGG 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,909,349
Number of Sequences: 27780
Number of extensions: 280236
Number of successful extensions: 835
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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