Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8g18
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97653-1|CAJ55832.1|  479|Homo sapiens F-box and leucine-rich re...    31   3.6  
BC036680-1|AAH36680.1|  479|Homo sapiens F-box and leucine-rich ...    31   3.6  
AE006464-13|AAK61245.1|  581|Homo sapiens possible G-protein rec...    31   3.6  
AL833836-1|CAD38696.1|  996|Homo sapiens hypothetical protein pr...    31   4.8  
AL357336-3|CAI40457.1|  996|Homo sapiens novel protein protein.        31   4.8  
AL139341-1|CAI17220.1|  996|Homo sapiens novel protein protein.        31   4.8  

>Z97653-1|CAJ55832.1|  479|Homo sapiens F-box and leucine-rich
           repeat protein 16 protein.
          Length = 479

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 6   HLQHCVAVVIQKKITKKEIMNIIHVFIAITFMKYSKCYVIEDSGKVDAQKQLLRKLEIL 182
           H  H + ++   +IT   ++N++H    +T +  S C  + D G V+   + LRKL  L
Sbjct: 294 HSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDG-VELVAENLRKLRSL 351


>BC036680-1|AAH36680.1|  479|Homo sapiens F-box and leucine-rich
           repeat protein 16 protein.
          Length = 479

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 6   HLQHCVAVVIQKKITKKEIMNIIHVFIAITFMKYSKCYVIEDSGKVDAQKQLLRKLEIL 182
           H  H + ++   +IT   ++N++H    +T +  S C  + D G V+   + LRKL  L
Sbjct: 294 HSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDG-VELVAENLRKLRSL 351


>AE006464-13|AAK61245.1|  581|Homo sapiens possible G-protein
           receptor protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 6   HLQHCVAVVIQKKITKKEIMNIIHVFIAITFMKYSKCYVIEDSGKVDAQKQLLRKLEIL 182
           H  H + ++   +IT   ++N++H    +T +  S C  + D G V+   + LRKL  L
Sbjct: 326 HSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDG-VELVAENLRKLRSL 383


>AL833836-1|CAD38696.1|  996|Homo sapiens hypothetical protein
           protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 162 LRKLE-ILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKS 311
           L++LE +LQ+ K E    ++ K I   ++G    +Q+HE +    E+++K+
Sbjct: 278 LKELERVLQQKKIEAECLKLRKEIVEAQSGVKLIKQRHEEDDEEEEEEDKT 328


>AL357336-3|CAI40457.1|  996|Homo sapiens novel protein protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 162 LRKLE-ILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKS 311
           L++LE +LQ+ K E    ++ K I   ++G    +Q+HE +    E+++K+
Sbjct: 278 LKELERVLQQKKIEAECLKLRKEIVEAQSGVKLIKQRHEEDDEEEEEEDKT 328


>AL139341-1|CAI17220.1|  996|Homo sapiens novel protein protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 162 LRKLE-ILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKS 311
           L++LE +LQ+ K E    ++ K I   ++G    +Q+HE +    E+++K+
Sbjct: 278 LKELERVLQQKKIEAECLKLRKEIVEAQSGVKLIKQRHEEDDEEEEEEDKT 328


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,840,532
Number of Sequences: 237096
Number of extensions: 1742973
Number of successful extensions: 8234
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8228
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)