Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8g17
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 70 1e-12
03_02_0592 - 9687700-9687933,9688515-9688591,9688891-9688999,968... 54 7e-08
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 53 2e-07
10_08_0708 + 20040482-20040808,20040906-20041280 51 9e-07
10_08_0724 + 20114796-20115506 49 3e-06
10_08_0702 + 19978917-19979243,19979350-19979724 47 1e-05
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 47 1e-05
10_08_0692 + 19918746-19919072,19919419-19919781,19919841-199199... 46 2e-05
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 45 4e-05
01_07_0183 + 41840089-41840394,41840869-41841249 45 4e-05
10_08_0700 + 19969616-19969942,19970044-19970422,19970562-19970665 45 6e-05
10_06_0109 + 10883034-10883780 44 1e-04
10_08_0710 + 20070655-20070990,20071074-20071469 43 2e-04
05_04_0304 - 20048518-20049003,20049074-20049412 42 3e-04
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 42 4e-04
01_07_0182 + 41838805-41839152,41839230-41839610 42 5e-04
03_02_0591 - 9682476-9682487,9682805-9682885,9683085-9683192,968... 41 0.001
01_07_0184 + 41846416-41847132 40 0.001
10_08_0715 + 20084586-20084912,20085030-20085416 40 0.002
10_08_0714 + 20081801-20082130,20082205-20082597 40 0.002
10_08_0707 + 20037301-20037633,20037862-20038248 40 0.002
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 40 0.002
03_05_0204 - 21961332-21961715,21962030-21962374 39 0.003
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 35 0.046
07_03_0313 + 16620817-16621515 35 0.046
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 35 0.060
12_02_0219 + 15822050-15824896 29 4.0
08_01_0425 - 3751326-3751408,3752361-3752646,3752820-3753137,375... 29 4.0
03_02_0590 - 9678775-9678826,9678905-9678993,9679093-9679200,967... 28 6.9
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +1
Query: 292 CPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINV 471
CP+ +R +LT+ K++PYD+ ++L KP+W SP+G VP ++ E + + DS++I
Sbjct: 80 CPFTQRVLLTIEEKHLPYDIKLVDLANKPDWFLKISPEGKVPIVKLEE-QWVADSDVITQ 138
Query: 472 YLDEKYPEIPLQASDP 519
++EKYPE P A+ P
Sbjct: 139 AIEEKYPE-PSLATPP 153
>03_02_0592 -
9687700-9687933,9688515-9688591,9688891-9688999,
9689162-9689260,9689368-9689454,9689570-9689630,
9689739-9689813,9689936-9689961
Length = 255
Score = 54.4 bits (125), Expect = 7e-08
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Frame = +1
Query: 250 PP--YSGKLRVFAMRFCPYAERTVLTLNAKNI--PYDLVFINLDQKPEWI-FNFSPKGTV 414
PP + G R++ FCP+A+R + N K + +LV I+L KP W +GTV
Sbjct: 25 PPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTV 84
Query: 415 PALEYEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSGLLYSSI 594
P+LE+ GK + +S + Y+D + L DP +R L+ ++A A + LYS +
Sbjct: 85 PSLEHN-GKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELI-AYANAFTKALYSPL 142
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 295 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 471
P+ R + L K +PY+L+ ++ K E + +P VP L + A+ +S +I
Sbjct: 17 PFVHRVEVALRLKGVPYELILEDMGNKSELLLAHNPVHKMVPVLLHGDRSAICESLVIVE 76
Query: 472 YLDEKYPEIPLQASDPLRRAQDKILV 549
Y+DE + PL +DPLRRA + V
Sbjct: 77 YVDEAFDGPPLLPADPLRRAMARFWV 102
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 298 YAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYL 477
Y R + L K + Y+L+ +L K + + N +P + + ++L +S +I Y+
Sbjct: 290 YGHRAEVALRLKGVRYELILEDLRNKSDLLLNHNPVHKLVPVLLHGDRSLSESLVILEYI 349
Query: 478 DEKYPEIPLQASDPLRRA 531
DE + P+ +DP RA
Sbjct: 350 DESFHGPPILPTDPYDRA 367
>10_08_0708 + 20040482-20040808,20040906-20041280
Length = 233
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGK 441
+L++ M P+A R L L+ K + Y+ V +L K E + +P VP L + GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYEYVEEDLKNKSELLLTSNPVHKKVPVLIHN-GK 65
Query: 442 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 531
+ +S +I Y+DE +P+ +PL SDP RA
Sbjct: 66 PVCESQVIVQYIDEAFPDAGVPLLPSDPYDRA 97
>10_08_0724 + 20114796-20115506
Length = 236
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 259 SGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEP 435
SG+L++ + PYA R + LN K++PY+ V NL K + + +P +VP L
Sbjct: 4 SGELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVL-LHA 62
Query: 436 GKALFDSNIINVYLDEKYP-----EIPLQASDPLRRA 531
G+ + +S +I Y+DE +P + SDP RA
Sbjct: 63 GRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERA 99
>10_08_0702 + 19978917-19979243,19979350-19979724
Length = 233
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGT-VPALEYEPGK 441
+L++ M PY R L L+ K + Y+ V +L K E + + +P VP L + GK
Sbjct: 7 ELKLLGMWASPYVLRVKLALSLKGLDYEYVEEDLKNKSELLLSSNPVNKKVPVLIHN-GK 65
Query: 442 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 531
+ +S II YLDE +P+ L +DP RA
Sbjct: 66 PVCESQIILQYLDEAFPDAGATLLPADPHERA 97
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL---DQKPEWIFNFSPKGTVPALEYEP 435
KLRV+ M R LN K + +DLV ++L K +P G +P L+ +
Sbjct: 7 KLRVYGMALSANVVRVATVLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQ-DG 65
Query: 436 GKALFDSNIINVYLDEKYPE-----IPLQASDPLRRAQDKILVESFAPAQSGLLY 585
+ L++S IN Y+ KY +P +AS ++ F PA SGL++
Sbjct: 66 DEVLYESRAINRYIATKYKAEGADLLPAEASPAKLEVWLEVESHHFYPAISGLVF 120
>10_08_0692 +
19918746-19919072,19919419-19919781,19919841-19919977,
19920298-19920304
Length = 277
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGK 441
+L++ M P+A R L L+ K + YD V + K E + + +P VP L + GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYDYVEEDFKNKSELLLSSNPVHKKVPVLIHN-GK 65
Query: 442 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 531
+ +S +I Y+DE +P+ + L +DP RA
Sbjct: 66 PICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 292 CPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINV 471
CP+++R +LTL K + ++ P+ SP+G VP GK + DS++I
Sbjct: 20 CPFSQRVLLTLEEKKM--FSAASGVETVPQLFLKISPEGKVPVFNGGDGKWIPDSDVITQ 77
Query: 472 YLDEKYP 492
++EKYP
Sbjct: 78 VIEEKYP 84
>01_07_0183 + 41840089-41840394,41840869-41841249
Length = 228
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 295 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 471
P+ R L K + Y+L+ +L K + + +P VP L + G+++ +S ++
Sbjct: 11 PFGHRAEAALRLKGVQYELLLEDLRSKSDLLLAHNPVHKLVPVLLHSDGRSVAESLVVVQ 70
Query: 472 YLDEKYPEIPLQASDPLRRAQ 534
Y+D+ + PL +DP RAQ
Sbjct: 71 YVDDAFHGPPLLPADPYARAQ 91
>10_08_0700 + 19969616-19969942,19970044-19970422,19970562-19970665
Length = 269
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGK 441
+L++ M P+A R L L+ K + YD V + K + + + +P VP L ++ GK
Sbjct: 7 ELKLLGMWASPFALRAKLALSFKGLSYDYVEEDFKNKSDVLLSSNPVHKKVPVLIHK-GK 65
Query: 442 ALFDSNIINVYLDEKYPE--IPLQASDPLRRA 531
+ +S +I Y+DE +P+ + L +DP RA
Sbjct: 66 PICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>10_06_0109 + 10883034-10883780
Length = 248
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Frame = +1
Query: 295 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 471
P+ R L L + + YDLV ++LD+K + + +P VP L + G+ + +S +I
Sbjct: 26 PFVTRVELALALRGLTYDLVAVDLDRKTDLLLAANPVHAKVPVLIHR-GRPVCESRVILE 84
Query: 472 YLDEKYP-----EIPL--QASDPLRRA 531
Y+D+ +P PL A DPL RA
Sbjct: 85 YIDDAFPFPGGGGAPLLPPADDPLARA 111
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGK 441
+L++ + PY R L+ K + Y+ V +L K E + + +P VP L + GK
Sbjct: 10 ELKLLGLWASPYVLRAKFALSFKGLSYENVEEDLHNKSELLLSSNPVHKKVPVLIHN-GK 68
Query: 442 ALFDSNIINVYLDEKYPEI--PLQASDPLRRA 531
+ +S II Y+DE +P+ L SDP RA
Sbjct: 69 PICESQIIVEYVDEAFPDAGESLLPSDPYDRA 100
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGK 441
+L++F Y R L L K + + +L K E + +P VP L + G+
Sbjct: 12 ELKLFGSWASSYTHRVQLALRLKALEFVYAEEDLGNKSEALLRLNPVHKKVPVLVHR-GR 70
Query: 442 ALFDSNIINVYLDEKYPEI-PLQASDPLRRA 531
L +S II YLD+ +PE PL SDP RA
Sbjct: 71 PLAESVIILQYLDDAWPESRPLLPSDPFDRA 101
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +1
Query: 238 GDVLPPYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL---DQKPEWIFNFSPKG 408
G P KL F C Y R L+L K + Y+ INL +Q +P
Sbjct: 18 GAAAPERRLKLYSFWRSSCSYRVRIALSL--KGLDYEYKPINLLANEQSHPEFEKLNPMK 75
Query: 409 TVPALEYEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRA 531
VPAL + DS I +YL++ YP+ PL DP +A
Sbjct: 76 YVPALVDGDDTVVVDSFAILLYLEDTYPQHPLLPQDPKMKA 116
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Frame = +1
Query: 295 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 471
P+ R L K + Y+L+ +L+ K + +P VP L + G+A+ +S +I
Sbjct: 14 PFVHRVEAALQLKGVAYELIHEDLENKSNLLLASNPVHKKVPVL-LDGGRAICESLVIVE 72
Query: 472 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSG---LLYSSIXCT 603
Y+D+ + P+ +DP RA + + F ++ LL+ + CT
Sbjct: 73 YVDDAFDGPPILPADPYDRATARFWAQ-FIDHKANLFMLLHHCVHCT 118
>03_02_0591 -
9682476-9682487,9682805-9682885,9683085-9683192,
9683307-9683383,9683495-9683603,9683696-9683794,
9684208-9684294,9684454-9684514,9684646-9684720,
9684826-9684854
Length = 245
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 250 PPYSGKLRVFAMRFCPYAERTVLTLNAKNI--PYDLVFINLDQKPEWI-FNFSPKGTVPA 420
P + G R++ CPYA+R + N K + +V I+L +P W P+ VP+
Sbjct: 28 PLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPS 87
Query: 421 LEYEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSGLLYSSI 594
LE+ + +S + Y+D + E P D + Q + ++ A + YSSI
Sbjct: 88 LEHN-NQVKGESLDLVKYIDTNF-EGPALLPDDSEKQQFAEELLAYTDAFNKASYSSI 143
>01_07_0184 + 41846416-41847132
Length = 238
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +1
Query: 253 PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPAL-- 423
P ++V PY++R L K +PY+L+ +L K + + +P VP L
Sbjct: 4 PAPAPVKVIGTFDSPYSQRAEAALRLKGVPYELILEDLRNKSDLLLTHNPIHKKVPVLLH 63
Query: 424 -EYEPGKALFDSNIINVYLDEKYP-EIPLQASDPLRRA 531
+ + A+ +S +I Y+DE +P + L +DP RA
Sbjct: 64 GDDDHRAAVCESLVIVEYVDEAFPAPLLLLPADPGLRA 101
>10_08_0715 + 20084586-20084912,20085030-20085416
Length = 237
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL-DQKPEWIFNFSP-KGTVPALEYEPG 438
+L++ PY R L L+ K + YD V ++ K E + + +P VP L + G
Sbjct: 6 ELKLLGFWASPYVCRVKLALHLKGLIYDYVKEDVFTNKSELLLSCNPVHAKVPVLIHN-G 64
Query: 439 KALFDSNIINVYLDEKYPE--IPLQASDPLRRA 531
K + +S +I Y+DE +P+ + L +DP RA
Sbjct: 65 KPICESQVIVQYIDEVFPDAGVTLLPADPHDRA 97
>10_08_0714 + 20081801-20082130,20082205-20082597
Length = 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +1
Query: 262 GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFI--NLDQKPEWIFNFSPKGTVPALEYEP 435
G+L++ PY R L L+ K + Y+ V + + K E + + +P +
Sbjct: 5 GELKLLGTWASPYVSRVKLALHLKGLSYEYVVEEDHFNNKSELLLSSNPVHKKVPVMIHN 64
Query: 436 GKALFDSNIINVYLDEKYPE--IPLQASDPLRRA 531
GK + +S II YLDE +P+ PL +D RA
Sbjct: 65 GKPICESLIIMEYLDEAFPDTAAPLLPADLHDRA 98
>10_08_0707 + 20037301-20037633,20037862-20038248
Length = 239
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = +1
Query: 295 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 471
P+ R L L K + Y+ V +L K E + +P +P L + GK + +S+II
Sbjct: 17 PFVTRVELALGLKGLSYEYVKQDLVNKSELLLASNPVHKKIPVLIHN-GKPVCESSIIVQ 75
Query: 472 YLDEKYPE----IPLQASDPLRRAQDKILV----ESFAPA 567
Y+DE +P+ L +DP RA + V + F PA
Sbjct: 76 YIDEAFPDAGAGAALLPADPYERAVARFWVAYVDDKFVPA 115
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 265 KLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL----DQKPEWIFNFSPKGTVPALEYE 432
KL +++ + R + LN K + Y+ +NL PE++ +P VPAL +
Sbjct: 13 KLGLYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFM-KVNPMKFVPAL-VD 70
Query: 433 PGKALFDSNIINVYLDEKYPEIPLQASD 516
+ DS I +YL++KYPE PL D
Sbjct: 71 GDAVIGDSYAIALYLEDKYPEHPLLPQD 98
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 295 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSP-KGTVPALEYEPGKALFDSNIINV 471
P+ R + L K + Y+ + +L+ K + + +P VP L + +A+ +S +I
Sbjct: 14 PFVHRAEVALRLKGVAYEFIHEDLNNKSDLLLAKNPIHKKVPVLLHGD-RAVCESLVIVE 72
Query: 472 YLDEKYPEIPLQASDPLRRA 531
Y+DE + PL +DP RA
Sbjct: 73 YIDEAFNGPPLLPADPYHRA 92
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +1
Query: 301 AERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLD 480
+ R + LN K + Y+ +N P++ +P +PAL + + DS I +YL+
Sbjct: 17 SHRIRIVLNLKGVDYEYKSVNPRTDPDYE-KINPIKYIPAL-VDGDLVVSDSLAIALYLE 74
Query: 481 EKYPEIPLQASDPLRRA 531
+KYP+ L D ++A
Sbjct: 75 DKYPQHALLPKDLKKKA 91
>07_03_0313 + 16620817-16621515
Length = 232
Score = 35.1 bits (77), Expect = 0.046
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Frame = +1
Query: 262 GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINL-DQKPEWIFNFSP-KGTVPALEYEP 435
G+L + P+ +R + L K +PYD L K + + +P VP L +
Sbjct: 4 GELVLLDFWASPFGQRCRIALAEKKLPYDYSEQELLGAKSDLLLRSNPIHAKVPVLLHGD 63
Query: 436 G--KALFDSNIINVYLDEKYPE-----IPLQASDPLRRAQ 534
G +A+ +S I YLD+ +P+ +P A DP RA+
Sbjct: 64 GDGRAVCESLAILEYLDDAFPDATPRLLPSAADDPYARAR 103
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 34.7 bits (76), Expect = 0.060
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = +1
Query: 283 MRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNI 462
M C Y R + LN K I Y+ + P++ +P VPAL + + DS
Sbjct: 16 MSSCSYRVR--IALNLKGIDYEYRAVTRGD-PDY-GKINPIKYVPAL-VDGDFTISDSLA 70
Query: 463 INVYLDEKYPEIPLQASDPLRRA 531
I +YL++KYP+ PL D ++A
Sbjct: 71 IILYLEDKYPQHPLLPQDLKKKA 93
>12_02_0219 + 15822050-15824896
Length = 948
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 466 NVYLDEKYPEIPLQASDPLRRAQDKI-LVESFAPAQSGLLYSSIXCTSSR 612
NV+ +E+ +PL+A D L+ + K+ + F L +SI C SR
Sbjct: 381 NVHQEEQELNLPLEAQDKLKETERKLGRMSKFITKVMKLTSASIRCLPSR 430
>08_01_0425 -
3751326-3751408,3752361-3752646,3752820-3753137,
3753301-3753834
Length = 406
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 397 SPKGTVPALEYEPGKALFDSNIINVYLDEKYPEIPLQA 510
+P+ +VP Y + +F ++ V L E PE+P+ A
Sbjct: 140 APRRSVPVKPYVVNEHMFRWEVVRVPLSEARPELPIAA 177
>03_02_0590 -
9678775-9678826,9678905-9678993,9679093-9679200,
9679652-9679750,9679827-9679957,9680014-9680080
Length = 181
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 349 LVFINLDQKPEWIFNFSPKGTVPALEYEPGKALFDSNIINVYLD 480
LV ++ + +P W PK T+P+LE+ K + +S + Y+D
Sbjct: 46 LVPMDTNDRPAWYKEVYPKNTLPSLEHN-NKIIGESLDLIKYID 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,472,119
Number of Sequences: 37544
Number of extensions: 263824
Number of successful extensions: 576
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -