Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8g09
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 73 3e-14
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 46 5e-06
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 44 2e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 43 3e-05
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 42 1e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 41 2e-04
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 40 4e-04
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 39 7e-04
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 38 0.001
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 0.002
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 36 0.004
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 34 0.021
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 30 0.25
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 30 0.34
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.59
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 29 0.77
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 28 1.4
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 1.8
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 27 1.8
SPCC4G3.05c |mus81||Holliday junction resolvase subunit Mus81|Sc... 27 2.4
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 27 2.4
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 27 2.4
SPBC902.03 |||Spo7 homolog|Schizosaccharomyces pombe|chr 2|||Manual 26 5.5
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.2
SPAC23A1.02c |||phosphoprotein phosphatase |Schizosaccharomyces ... 25 9.5
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 73.3 bits (172), Expect = 3e-14
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 375 FIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTR-YRGIFHALYVIARADGALA 551
F+ GGLA GA +TNP +V+KTR QLQG+L K + S R Y+ + A +IAR +G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQL-TKLDPSKRIYKSVGQAFSLIARHEGIRG 85
Query: 552 LQKGLAPAMLLGFTMNSVRLGMY 620
LQ+GL A + +N RLG Y
Sbjct: 86 LQRGLGTAYVYQICLNGCRLGFY 108
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 46.0 bits (104), Expect = 5e-06
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 372 DFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALA 551
+ I G + G+ T ++ P DV+K+R+Q + Q +Y + AL +AR +G A
Sbjct: 202 NLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAG---QVPKYNWAYPALVTVAREEGFTA 258
Query: 552 LQKGLAPAML 581
L KG P +L
Sbjct: 259 LYKGFVPKVL 268
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +3
Query: 375 FIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALAL 554
F G +AG+ + P+DVVKTR+QL K++ Y G F L I + +G L
Sbjct: 12 FAAGAVAGISEVLTLYPLDVVKTRMQLS---VGKSD----YNGTFDCLKKIVKNEGPHRL 64
Query: 555 QKGLAPAMLL 584
+G+ P +L+
Sbjct: 65 YRGILPPILM 74
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = +3
Query: 366 TMDFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGA 545
T I GGL+G A+ +T P+DVVKT LQ +G + + + +G + I G
Sbjct: 205 TSHIISGGLSGAIASSLTTPLDVVKTLLQTRG--SSSIPEVRKCKGSLDVVRFIYNYGGI 262
Query: 546 LALQKGLAPAMLLGFTMNSVRLGMYHVAE 632
+ KG+ P M++ +V Y +
Sbjct: 263 PSFFKGIRPRMVVAMPATAVSWAAYEAGK 291
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/68 (19%), Positives = 34/68 (50%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQ 557
+ G +G+ + P+D +KTR+Q+ + + I +++ I+ +G +L
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 558 KGLAPAML 581
+G++ ++
Sbjct: 79 RGISSVIM 86
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 43.2 bits (97), Expect = 3e-05
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Frame = +3
Query: 375 FIIGGLAGVGATIITNPMDVVKTRLQ--------LQGELKAKTEQSTRYRGIFHALYVIA 530
FI GG+AG+ I T P+DVVKTRLQ L+ K+K+ + YR ++
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILK 111
Query: 531 RA---DGALALQKGLAPAMLLGFTMNSVRLGMY 620
+G AL +GL P ++ S+ Y
Sbjct: 112 NVKVHEGTRALFRGLGPNLIGTIPARSINFFSY 144
Score = 41.9 bits (94), Expect = 8e-05
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +3
Query: 390 LAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQKGLA 569
+AGV + TNP+ +VKTRLQL K+ Q+ +YR + R +G L KGL+
Sbjct: 171 IAGVITSAATNPIWLVKTRLQLD----KKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLS 226
Query: 570 PAMLLGFTMNSVRLGMY 620
A LLG ++++ +Y
Sbjct: 227 -ASLLGVGESTLQWVLY 242
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 372 DFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAK--TEQSTRYRGIFHALYVIARADGA 545
D I GG AG+ ++++ P+DVVKTR Q Q + + + G ++ I +G
Sbjct: 8 DAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGI 67
Query: 546 LALQKGLAPAMLLGF 590
L +G+ P M+LG+
Sbjct: 68 AGLYRGVGP-MMLGY 81
Score = 29.1 bits (62), Expect = 0.59
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 390 LAGVGATIITNPMDVVKTRLQLQGELKAKT 479
+AG + +TNP+ VVKTRL Q +A +
Sbjct: 142 IAGAASVTLTNPIWVVKTRLVTQSHPRASS 171
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 375 FIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALAL 554
F++G +AG+ T P+D VK+R+Q L A E Y+ H Y I DG L
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ---SLSASKE----YKNSIHCAYKILTQDGLLRF 259
Query: 555 QKGLAPAM 578
G P +
Sbjct: 260 WSGATPRL 267
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQL 455
I GG+AG IT P + KTRLQL
Sbjct: 22 IAGGVAGAIEISITYPAEFAKTRLQL 47
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 39.5 bits (88), Expect = 4e-04
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = +3
Query: 369 MDFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGAL 548
++F+ GG++G AT++T P DV KT Q+ G T RG F + + + G
Sbjct: 248 INFVSGGISGTLATLLTQPFDVSKTAKQVHGH--------TLTRGQF--MLTLWKRGGPK 297
Query: 549 ALQKGLAPAMLLGFTMNSVRLGMYHVAE 632
AL KG P + ++ + YH+ +
Sbjct: 298 ALWKGTLPRCVKVAPSCAIMISSYHLTK 325
Score = 31.9 bits (69), Expect = 0.083
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Frame = +3
Query: 390 LAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIF--------------HALYVI 527
+ V T+ P+DVVKTRLQ + + + Q I LY I
Sbjct: 33 VGSVITTLTVTPLDVVKTRLQSESISQYSSTQPISSAKILGKGRPAPKPLGGPVSGLYQI 92
Query: 528 ARADGALALQKGLAPAMLLGFTMNSVR 608
AR +G +L +GL P++ + N+V+
Sbjct: 93 ARHEGVRSLWRGLVPSLTMLLPANTVQ 119
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 38.7 bits (86), Expect = 7e-04
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Frame = +3
Query: 300 ATFSLLTHYEYC--HSVIYLFIL*TMDFIIGGLAG-VGATIITNPMDVVKTRLQLQGELK 470
AT + YEY H + + T+ F++ G G + A+++ P +V+KTRLQLQG
Sbjct: 86 ATALFFSSYEYTKRHLMSNYNLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYN 145
Query: 471 AKTEQST-RYRGIFHALYVIARADGALALQKGLAPAMLLGFTMNSVRLGMY 620
QS Y A+ IA+ +G G +L + +L Y
Sbjct: 146 NPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFY 196
Score = 37.9 bits (84), Expect = 0.001
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 372 DFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALA 551
+ I G LAG GA +T P+DV KTRLQ K F A +++ A +
Sbjct: 217 ELITGSLAGAGAGFLTTPLDVAKTRLQTMIRTTDKVSDDINSGRYFFAKDENSKSKSAAS 276
Query: 552 LQK 560
L K
Sbjct: 277 LVK 279
Score = 27.5 bits (58), Expect = 1.8
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGAL-AL 554
I GG+ G A + + +D VKTR Q + +Y G+ I +G L
Sbjct: 20 IAGGIGGATADFLMHSLDTVKTRQQ-------AALYTNKYNGMVKCYSTILCEEGVFHGL 72
Query: 555 QKGLAPAMLLG 587
G+ P ML+G
Sbjct: 73 YSGVCP-MLIG 82
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 38.3 bits (85), Expect = 0.001
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQ 557
I G +AG A +T P DVVKTR+ ++Q Y +F ++A +G LAL
Sbjct: 263 ISGSIAGGIAAALTTPFDVVKTRIM-------TSQQRLSY--VFTIKSIVAH-EGFLALY 312
Query: 558 KGLAPAMLLGFTMNSVRLGMYHV 626
KG+ P +L ++ LG Y V
Sbjct: 313 KGIVPRVLWLSGGGAIFLGCYDV 335
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 384 GGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGA 545
G AG+ + P+D +KTRLQ +G YRG+ L + A GA
Sbjct: 89 GICAGLAVDLSLFPIDTLKTRLQAKGGFVKNGGFHGVYRGLGSIL--VGSAPGA 140
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 366 TMDFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGA 545
T DF+ G GV ++ P D VK RLQ Q + S Y + I++ +G
Sbjct: 18 TKDFLAGVSGGVAQVLVGQPFDCVKVRLQSQSNV------SPIYNNALDCVKKISKNEGL 71
Query: 546 LALQKG-LAPAMLLGFTMN 599
A KG + P + +GF ++
Sbjct: 72 AAFYKGTVLPLLGIGFCVS 90
Score = 29.9 bits (64), Expect = 0.34
Identities = 19/81 (23%), Positives = 32/81 (39%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQ 557
+ G AG + P D+VK+++Q G L T Y+ + I G
Sbjct: 217 VFGAGAGYAMWLAAYPFDIVKSKIQTDGFLSKAT-----YKNSWQCAKGIYTKAGLRGFY 271
Query: 558 KGLAPAMLLGFTMNSVRLGMY 620
+G P ++ N+V +Y
Sbjct: 272 RGFVPVLVRAAPANAVTFYVY 292
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 372 DFIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALA 551
DF++GG++ + P++ VK +Q Q E+ S RY+GI A +G ++
Sbjct: 30 DFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVIS 89
Query: 552 LQKG 563
L +G
Sbjct: 90 LWRG 93
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +3
Query: 384 GGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQKG 563
GG AG + + +D +TRL + AK ++ G+ R+DG L +G
Sbjct: 139 GGAAGAASLLFVYSLDYARTRLANDAK-SAKKGGERQFNGLVDVYRKTYRSDGLRGLYRG 197
Query: 564 LAPAMLLGFTMNSVRLGMY 620
P+++ + GMY
Sbjct: 198 FGPSVVGIVVYRGLYFGMY 216
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 33.9 bits (74), Expect = 0.021
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 384 GGLAGVGATIITNPMDVVKTRLQLQ 458
G ++G AT ITNP D++KTR+QL+
Sbjct: 217 GLISGATATAITNPFDMLKTRVQLE 241
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.3 bits (65), Expect = 0.25
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = +3
Query: 375 FIIGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALAL 554
FI GG+AG+ + T P+D + ++ L + +K + + H V+ +G +
Sbjct: 131 FISGGIAGIVSRTCTAPLD--RLKVMLISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSF 188
Query: 555 QKGLAPAMLLGFTMNSVRLGMY 620
G +L +S++ G Y
Sbjct: 189 FVGNGINVLKVMPESSIKFGTY 210
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 375 FIIGGLAGVGATIITNPMDVVKTRLQ 452
++ GG+AG A + P+D +K R+Q
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQ 257
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.9 bits (64), Expect = 0.34
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQL-QGELKAKTE---QSTRYRGIFHALYVIARADGA 545
I L V AT I+ P+D+VKTR Q+ K E Q+ + GI ++ G
Sbjct: 178 ICSALGTVVATTISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGV 237
Query: 546 LALQKGLAPAM 578
+GL M
Sbjct: 238 KGFTRGLFTRM 248
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.1 bits (62), Expect = 0.59
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +3
Query: 387 GLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQKGL 566
G AG +TNP+ VVK+R+ + Y F Y + + +G G
Sbjct: 106 GFAGCIVAALTNPIWVVKSRI---------LSKRVNYTNPFFGFYDLIKNEGLRGCYAGF 156
Query: 567 APAMLLGFTMNSVRLGMY 620
AP+ LLG + +++ Y
Sbjct: 157 APS-LLGVSQGALQFMAY 173
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 28.7 bits (61), Expect = 0.77
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 390 LAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQKGLA 569
L+G + P+DV+KT++ L+ E YR + +Y + +G +KGL
Sbjct: 176 LSGAITAAVLTPLDVIKTQINLRPE---------SYRKVVRRIY---KENGIFGFEKGLG 223
Query: 570 PAMLLGFTMNSVRLGMY-HV 626
+ S+ LG Y HV
Sbjct: 224 LRVFASSLGLSIYLGTYEHV 243
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQLQ 458
+ G +AG + T P+D+ +TRL ++
Sbjct: 120 LFGAIAGAASCATTYPLDIARTRLSIE 146
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 381 IGGLAGVGATIITNPMDVVKTRLQLQGELKAKTEQSTRYRGIFHALYVIARADGALALQK 560
+GG G+ +T P DV++ R Q + Y+ I A++ I + +G +
Sbjct: 232 LGGFTGIIGQTLTFPADVLRRRFQ----VNRIPGIGHNYKNIKSAIFHIYKTEGINGFFR 287
Query: 561 GLAPAML 581
G + ML
Sbjct: 288 GYSSNML 294
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 378 IIGGLAGVGATIITNPMDVVKTRLQL-QGELKAKTEQSTRYRGI 506
+ GG++ V + P DV+K R+Q+ Q L+ +++ + G+
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSSLRPVFKETVQKEGV 64
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 369 MDFIIGGLAGVGATIITNPMDVVKTR 446
++F+ G AG+ AT+ + P+D ++T+
Sbjct: 106 VNFLCGTSAGIFATLTSYPLDTMRTK 131
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 383 RRFGWSRSHNNNKSNGRSENSPAAT 457
R+ WSRS +NN S +S +SPA +
Sbjct: 113 RKKSWSRSLSNNISLSQSSSSPATS 137
>SPCC4G3.05c |mus81||Holliday junction resolvase subunit
Mus81|Schizosaccharomyces pombe|chr 3|||Manual
Length = 608
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 619 YIPSLTEFMVKPSSIAGARPFCSAKAPSAL--AITYNAW 509
Y+ + EF KP + A+P+C + SA + Y AW
Sbjct: 134 YMLNKHEFATKPQIVTMAQPYCDSSFGSATDRNMRYTAW 172
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 519 YVIARADGALALQKGLAPAMLLGFTMNSVRLGMYH 623
YV RA G L G A ++ GF M+ G+Y+
Sbjct: 385 YVRPRATGKELLYTGHASLIVFGFAMSGFATGLYY 419
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/22 (50%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +3
Query: 390 LAGVGATIITN-PMDVVKTRLQ 452
+AG A++I + P+DV+KTR+Q
Sbjct: 219 IAGASASLIVSAPLDVIKTRIQ 240
>SPBC902.03 |||Spo7 homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 203 DLTCIYIILCVKVT*L*FSLSGVYLKVIECFASYILAVN 319
DLT +LC VT L F SG+Y I + Y+ VN
Sbjct: 65 DLTYKLCLLCGIVTLLLFYFSGLYRTTIVYPSRYVQQVN 103
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 398 SRSHNNNKSNGRSENSPAATGRIESEDRT 484
S ++N N+SN +ENSP A T
Sbjct: 410 SSNNNTNQSNASNENSPNAPSAANDNTET 438
>SPAC23A1.02c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 430
Score = 25.0 bits (52), Expect = 9.5
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -3
Query: 519 ITHGRSPYIWWTVRSSLSI 463
++HG YIWW + S+ +
Sbjct: 398 LSHGGPSYIWWALHISVCV 416
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,653,179
Number of Sequences: 5004
Number of extensions: 52600
Number of successful extensions: 149
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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