Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8g06
(525 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 39 5e-04
SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizos... 36 0.004
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 36 0.004
SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomy... 34 0.011
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce... 33 0.026
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 30 0.18
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 28 0.74
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 27 1.7
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 1.7
SPAC2C4.04c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 3.0
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 26 4.0
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 5.2
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 25 5.2
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 25 6.9
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 25 6.9
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 25 6.9
SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce... 25 6.9
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 25 9.1
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 25 9.1
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 38.7 bits (86), Expect = 5e-04
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 334 GPA-VAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEY 510
GPA V I + + I F E A P AG YNY+ + F +GWN + Y
Sbjct: 114 GPASVIIDYTLIGIMMFFTVYALGELAVSYPVAGGFYNYAVRFIDPAWGFAVGWNYFMNY 173
Query: 511 AI 516
+
Sbjct: 174 FV 175
>SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 581
Score = 35.9 bits (79), Expect = 0.004
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPA-VAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFI 474
YV +G+ A GPA V I++++ I +F E A P AGS Y+ +
Sbjct: 96 YVGSGS-AFADGGPASVIINYILIGIMMIFVIYALGELAIAYPVAGSFNTYATRFIDPAW 154
Query: 475 AFTIGWNLILEYAI 516
F + WN L Y +
Sbjct: 155 GFAVSWNYFLNYFV 168
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 35.9 bits (79), Expect = 0.004
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +1
Query: 334 GPAVAIS-FLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSV----GEFIAFTIGW 492
GPA S LV S+ C AE S +P AGS Y ++ S G F++F + W
Sbjct: 108 GPAAYWSAMLVTGFCSIVTAACLAEICSALPAAGSIYLWAAESAGPRFGRFVSFLVAW 165
>SPCPB1C11.02 |||amino acid permease, unknown 16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 505
Score = 34.3 bits (75), Expect = 0.011
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 331 AGPA-VAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILE 507
+GPA + ISF V +S L E + +P AGS Y V E ++F++ WN L
Sbjct: 47 SGPASLLISFSVLGVSVYCTMLALGEMSVYMPVAGSFCTYVGRYVDEALSFSLTWNYWLN 106
Query: 508 YAIGTA 525
I A
Sbjct: 107 DTIALA 112
>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 33.1 bits (72), Expect = 0.026
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPA-VAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFI 474
YV +G+ A GPA V I++++ I F E A P AGS Y+ +
Sbjct: 96 YVGSGS-ALADGGPASVIINYILIGIMMFFVIYALGEMAVAYPVAGSFNTYATRFIDPAW 154
Query: 475 AFTIGWNLILEYAI 516
F + WN Y +
Sbjct: 155 GFAVSWNYFFNYFV 168
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 30.3 bits (65), Expect = 0.18
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 301 VLAGAVAKTVAGP-AVAISFLVAAISSVFAGLCYAEFA--SRVPKAGSGYNYSYVSVGEF 471
V+ A GP ++ I++L+ I+ + E A S K SG++ YV +
Sbjct: 65 VIGSGSALLKGGPGSLFIAYLMTGINLYVVLISLGEMAAFSSDDKGFSGFSSRYVD--KA 122
Query: 472 IAFTIGWNLILEYAI 516
+ F GWN +YAI
Sbjct: 123 LGFATGWNYFFKYAI 137
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 28.3 bits (60), Expect = 0.74
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 343 VAISFLVAAISSVFAGLC--YAEFASRVPKAG--SGYNYSYVSVGEFIAFTIGWNLIL 504
+ I+ VA SSV G + + V K +GY SY++V A +GWN+++
Sbjct: 203 ILITLFVAYTSSVHIGSIDKMYDLLTEVSKTNPSTGYKGSYLTVTNRDAVFVGWNIVI 260
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 27.1 bits (57), Expect = 1.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 507 LQDQVPTNRERDELPDAHVT 448
++D++P E +ELP+ HVT
Sbjct: 93 IKDRIPVYYEEEELPEPHVT 112
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 1.7
Identities = 21/89 (23%), Positives = 32/89 (35%)
Frame = -2
Query: 434 EPAFGTLEANSA*HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVR 255
EP L + ++ P N KK +A L P + R +
Sbjct: 242 EPQLTFLRSKNSIEKPRNFRREKFLKKFLAMQKEIKYLRKRKLQI-RKIPNYKYSDRSLN 300
Query: 254 SNSPRHLDNWVVSSS*SIFLHRRSVAKIL 168
S +P+ DNW + S L V+K+L
Sbjct: 301 SKTPKSQDNWTTQVTPSSLLGVSEVSKVL 329
>SPAC2C4.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 125
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 175 RSYRSPSLKILIKSQSSRPQKLGINLKKD 89
R+ +LKI +K+Q + Q L INL D
Sbjct: 55 RTTHFDTLKIYVKAQQHKTQNLAINLDHD 83
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 4.0
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 334 GPAVAISFLVAAISSVFAGLCYA--EFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILE 507
G A ++ + + S+ Y+ E A P GS + Y + FT+GWN +
Sbjct: 112 GGAASVLICYSLVGSMVLMTVYSLGELAVAFPINGSFHTYGTRFIHPSWGFTLGWNYLAS 171
Query: 508 Y 510
+
Sbjct: 172 F 172
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -2
Query: 389 PANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPT 270
P+ T +K AGP T + P + P PRV T
Sbjct: 277 PSTTTSSRFSKFFNGLAGPETSKTSTPNMSNNPSPRVANT 316
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 5.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 181 SRRSYRSPSLKILIKSQSSRPQKLGIN-LKKDLHKHERELL*KQFHHVKHTTD 26
+R+ SL++ IK + R ++ G++ L K+ H E+E + K + H TD
Sbjct: 59 ARKFNLQQSLEMFIKCEKWR-KEFGVDDLIKNFHYDEKEAVSKYYPQFYHKTD 110
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 6.9
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 357 FGGSHF--FCICWVMLRRIRFKSPKS 428
F G+H FC+ +LRR F+SP+S
Sbjct: 296 FPGTHHSAFCLGDAVLRRFVFRSPRS 321
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 335 PATVLATAPASTYTPRPRVLPTP 267
P TV T +T+TP P TP
Sbjct: 929 PNTVTTTKATTTFTPTPTTTTTP 951
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 25.0 bits (52), Expect = 6.9
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 340 AVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAI 516
A +S +V G+C + +R + N ++ GEF A G N+IL+ A+
Sbjct: 20 ASPVSSIVTPTKRNVVGICAMDAKARSKPCRNILN-RIIAEGEFEAIVFGDNMILDEAV 77
>SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 170
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 362 WQPFLLYLLGYVTQNSLQESQ 424
W PFL +LG V NS+ +S+
Sbjct: 61 WIPFLCSILGIVIVNSIDKSR 81
>SPAC22E12.17c |glo3||ARF GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 24.6 bits (51), Expect = 9.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -3
Query: 184 ASRRSYRSPSLKILIKSQSSRPQKLGI---NLKKDLHKHERELL 62
A R R+ S K +SRPQKLGI N D + E+ +L
Sbjct: 232 ARARPIRASSRPTASKLGASRPQKLGIKKANADIDFDEFEKAVL 275
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 66 NSLSCLWRSFFKFIPSFWGRELCDLIRIFKDGL 164
NS L +FF F SFW ++ I F + L
Sbjct: 812 NSFGKLPSNFFTFPASFWDAKISSCIPFFSNKL 844
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,016,184
Number of Sequences: 5004
Number of extensions: 38989
Number of successful extensions: 127
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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