Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8g06
(525 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 103 1e-22
12_02_1169 - 26655170-26655332,26655429-26655504,26655603-266557... 99 2e-21
10_08_0135 - 15118082-15118300,15118388-15118546,15118783-151188... 97 8e-21
12_02_1090 - 25994366-25995410,25995632-25995971,25997266-25997686 79 3e-15
04_04_0676 - 27187778-27188316,27188441-27188530,27189249-271894... 77 7e-15
03_05_0456 - 24498212-24499581,24502660-24503071 77 9e-15
06_03_0363 + 19904002-19905792 73 2e-13
01_01_0771 - 5982826-5983327,5983424-5984772 73 2e-13
02_05_0177 + 26505956-26506202,26506838-26507247,26507448-265076... 71 8e-13
12_01_0368 + 2815424-2815658,2816898-2817120,2818329-2818680,281... 70 1e-12
11_01_0345 + 2579602-2579836,2581262-2581484,2582822-2583173,258... 68 4e-12
07_03_0387 - 17536026-17536636,17536772-17537150 31 0.43
01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305 30 0.99
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 29 1.7
04_01_0239 - 3126367-3127230,3127342-3128247 29 2.3
12_01_0819 + 7545656-7546006,7546087-7546162,7547196-7547401,754... 29 3.0
11_01_0340 + 2534998-2535660 28 4.0
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169... 28 4.0
03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405 28 4.0
02_05_0883 - 32481502-32483085 28 4.0
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 28 5.3
05_06_0076 + 25381814-25381880,25382927-25382967,25383398-253835... 28 5.3
04_04_0772 + 27970494-27972875 28 5.3
04_03_0712 + 18959770-18959930,18961115-18961238 28 5.3
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 27 7.0
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 27 7.0
04_03_0737 - 19152942-19154930 27 9.2
04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738 27 9.2
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134... 27 9.2
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 27 9.2
>03_05_0530 -
25306788-25306919,25307446-25308037,25308152-25308975,
25309533-25309592,25310115-25310180,25310318-25310461,
25310616-25310756,25310898-25311056,25311818-25311884,
25311986-25312158,25312237-25312333,25312410-25312528,
25312867-25312951,25313120-25313321,25314456-25314633
Length = 1012
Score = 103 bits (246), Expect = 1e-22
Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Frame = +1
Query: 154 KMGCGKIFATLRRCKKIDYD-------DDTTQLSRCLGLFDXXXXXXXXXXXXXXYVLAG 312
+ G G F +L R K++D D + QL++ L + YVL G
Sbjct: 15 RRGWGGGFPSLMRRKQVDSDRVRAAEGEGQPQLAKELNIPALVAIGVGSTIGAGVYVLVG 74
Query: 313 AVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGW 492
VA+ AGPA+ ISFL+A I+S + CYAE ASR P AGS Y+YSY+ VGE +A+ IGW
Sbjct: 75 TVAREHAGPALTISFLIAGIASALSAFCYAELASRCPSAGSAYHYSYICVGEGVAWLIGW 134
Query: 493 NLILEYAIG 519
L+LEY IG
Sbjct: 135 ALVLEYTIG 143
>12_02_1169 -
26655170-26655332,26655429-26655504,26655603-26655715,
26655808-26655913,26656001-26656235,26656415-26656573,
26657279-26657377,26657472-26657568,26657650-26657768,
26657860-26658000,26658100-26658184,26658287-26658488,
26659274-26659379
Length = 566
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIA 477
YVL G VA+ AGPA+ +SFL+A +++ + CYAE ASR P AGS Y+YSY+ VGE +A
Sbjct: 46 YVLVGTVAREHAGPALTLSFLIAGVAAALSAFCYAELASRCPSAGSAYHYSYICVGEGVA 105
Query: 478 FTIGWNLILEYAIG 519
+ IGW LILEY IG
Sbjct: 106 WLIGWALILEYTIG 119
>10_08_0135 -
15118082-15118300,15118388-15118546,15118783-15118849,
15118969-15119141,15119602-15119698,15119782-15119900,
15120000-15120140,15120214-15120298,15120411-15120612,
15120906-15120970,15121365-15121654
Length = 538
Score = 97.1 bits (231), Expect = 8e-21
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIA 477
YVL G VA+ AGPA+ +SFL+A I++ + LCYAE + R P AGS Y+YSY+ +GE +A
Sbjct: 129 YVLVGTVAREHAGPALTLSFLIAGIAAALSALCYAELSCRFPLAGSAYHYSYICIGESVA 188
Query: 478 FTIGWNLILEYAIG 519
+ IGW LILEY IG
Sbjct: 189 WLIGWALILEYTIG 202
>12_02_1090 - 25994366-25995410,25995632-25995971,25997266-25997686
Length = 601
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIA 477
+VL G A+ AGPAV +S+ V+ +S++ + LCY EFA +P AG + Y V +G+F+A
Sbjct: 97 FVLTGQEARDAAGPAVVLSYAVSGVSAMLSVLCYTEFAIEIPVAGGSFAYLRVELGDFVA 156
Query: 478 FTIGWNLILEYAIGTA 525
F N++LEY IG A
Sbjct: 157 FIAAGNILLEYCIGGA 172
>04_04_0676 -
27187778-27188316,27188441-27188530,27189249-27189480,
27189569-27189899,27190369-27190591,27190772-27191132
Length = 591
Score = 77.4 bits (182), Expect = 7e-15
Identities = 36/105 (34%), Positives = 57/105 (54%)
Frame = +1
Query: 211 DDDTTQLSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVAISFLVAAISSVFAG 390
D ++ R L +D +V G VA+ AGPAV S+++A +S++ +
Sbjct: 37 DRSGARMKRRLEWYDLVGLGVGGMLGAGVFVTTGRVARDTAGPAVFASYVIAGVSALLSS 96
Query: 391 LCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
CYAEF+ RVP AG ++Y V+ GE + F G N+++EY + A
Sbjct: 97 FCYAEFSVRVPAAGGAFSYLRVTFGELVGFFGGANILMEYVLSNA 141
>03_05_0456 - 24498212-24499581,24502660-24503071
Length = 593
Score = 77.0 bits (181), Expect = 9e-15
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIA 477
+VL G A+ GPAV IS++V+ +S++ + CY EFA +P AG + Y V +G+F+A
Sbjct: 94 FVLTGQEARNAVGPAVVISYVVSGVSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDFMA 153
Query: 478 FTIGWNLILEYAIGTA 525
F N++LEY IG A
Sbjct: 154 FVAAGNILLEYCIGGA 169
>06_03_0363 + 19904002-19905792
Length = 596
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = +1
Query: 229 LSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEF 408
L RCL D +VL G A+ AGPA+ +++ A S++ + CYAE
Sbjct: 72 LRRCLSWLDLAFLGFGSVVGSGVFVLTGQEARFDAGPAIPLAYAAAGFSALLSSFCYAEL 131
Query: 409 ASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
A+ +P AG ++Y V +G+ AF N++LE +G A
Sbjct: 132 ATEIPSAGGSFSYLRVELGDIAAFLAAGNILLEAVVGAA 170
>01_01_0771 - 5982826-5983327,5983424-5984772
Length = 616
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/100 (36%), Positives = 53/100 (53%)
Frame = +1
Query: 226 QLSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAE 405
++ RCL +D +VL G A AGPA+ +S++ + +S++ + CY E
Sbjct: 77 EMRRCLTWWDLTWFGFGSVIGAGIFVLTGQEAHDHAGPAIVLSYVASGLSAMLSVFCYTE 136
Query: 406 FASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
FA +P AG + Y V +G+ AF NLILE IGTA
Sbjct: 137 FAVEIPVAGGSFAYLRVELGDVAAFIAAANLILESIIGTA 176
>02_05_0177 +
26505956-26506202,26506838-26507247,26507448-26507624,
26507775-26507999,26508089-26508265,26508357-26508593,
26508855-26508944,26509102-26509254
Length = 571
Score = 70.5 bits (165), Expect = 8e-13
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +1
Query: 229 LSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEF 408
L R LG+F+ +V+ G VA+ AGP V ISF++A + V LCYAE
Sbjct: 47 LVRQLGVFELVLLGIGASIGAGIFVVTGTVARD-AGPGVTISFVLAGAACVLNALCYAEL 105
Query: 409 ASRVPK-AGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
ASR P G Y Y+Y + E AF + L+L+Y IG A
Sbjct: 106 ASRFPAVVGGAYLYTYAAFNELTAFLVFTQLMLDYHIGAA 145
>12_01_0368 +
2815424-2815658,2816898-2817120,2818329-2818680,
2819354-2819620
Length = 358
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIA 477
+V G + AGPAV +S+ +A + ++ + CY EFA +P AG ++Y V+ GE A
Sbjct: 24 FVTTGRATRLYAGPAVVVSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGELAA 83
Query: 478 FTIGWNLILEYAIGTA 525
F G NLI+EY A
Sbjct: 84 FLTGANLIMEYVFSNA 99
>11_01_0345 +
2579602-2579836,2581262-2581484,2582822-2583173,
2583894-2584125,2584683-2585266
Length = 541
Score = 68.1 bits (159), Expect = 4e-12
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIA 477
+V G + AGP V +S+ +A + ++ + CY EFA +P AG ++Y V+ GE A
Sbjct: 24 FVTTGRATRLYAGPGVVVSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGELAA 83
Query: 478 FTIGWNLILEYAIGTA 525
F G NLI+EY A
Sbjct: 84 FLTGANLIMEYVFSNA 99
>07_03_0387 - 17536026-17536636,17536772-17537150
Length = 329
Score = 31.5 bits (68), Expect = 0.43
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -2
Query: 428 AFGTLEANSA*HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSN 249
A GT+ + S P E A L AT+G + ATAPA TP P LP V
Sbjct: 123 ATGTVASGSPTLRPVTPAEGAG---LSATSGTTMIFATAPAPVSTPTP-ALPRSGTVLGA 178
Query: 248 SP 243
+P
Sbjct: 179 AP 180
>01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305
Length = 396
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 323 LATAPASTYTPRPRVLPTPREVRSNSPRHLDNWVVSSS 210
+ATA TY RPR LP P E R+ P + + SSS
Sbjct: 1 MATASVVTYLQRPRELPVP-EFRAPPPSPVTGVLTSSS 37
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 349 ISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIG-WNLILEYAIG 519
+SF +S AG +A V + + SYV+ EF+A G L+L++AIG
Sbjct: 171 VSFEEKFNTSAIAGFSRCSYAVLVEASAFDFRASYVTTDEFMASNGGQLPLVLDWAIG 228
>04_01_0239 - 3126367-3127230,3127342-3128247
Length = 589
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 388 GLCYAEFASRVPKAGSGYNYSYVSVGEFI 474
G+ YA F + V ++G+G +S+VSV FI
Sbjct: 121 GVVYAMFQNIVARSGTGTMFSWVSVAMFI 149
>12_01_0819 +
7545656-7546006,7546087-7546162,7547196-7547401,
7547498-7547584,7547673-7547765,7548172-7548326,
7548470-7548554,7548632-7548718,7548801-7548920,
7549707-7549808,7549903-7550070
Length = 509
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -2
Query: 293 PRPRVLPTPREVRSNSPR----HLDNWVVSSS 210
PRPR P+PR +RS PR H D + SSS
Sbjct: 27 PRPRPRPSPRLLRSARPRLVACHADTLLPSSS 58
>11_01_0340 + 2534998-2535660
Length = 220
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 368 AATKKLMATAGPATVLATAPASTYTPRPRVLPTP 267
A+ +KL A P L + PA +P P +LP P
Sbjct: 181 ASDRKLTTVAKPQQPLFSGPAFLTSPEPSMLPMP 214
>09_06_0038 -
20415363-20415883,20415917-20416596,20416858-20416911,
20417440-20417489,20417665-20417800,20419030-20419128,
20419411-20419676
Length = 601
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 386 ANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSNSPRHLDNWVVSSS* 207
A + +A+ A + A V A+APA++ +P P P P +S R + + +
Sbjct: 41 AASSSSSASSSAAAGSSVAMVSASAPAASSSPSPSPAPAPAPSSPHSDRKVAGPAIQTED 100
Query: 206 SIFL 195
+ FL
Sbjct: 101 TGFL 104
>03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405
Length = 410
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 361 VAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAF 480
+A I F+GLCY EF +R P +G + S+ +F+ F
Sbjct: 51 LAGIFLNFSGLCYPEFFAR-PSTTAGATTAISSLLDFLPF 89
>02_05_0883 - 32481502-32483085
Length = 527
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 383 NTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRS 252
N ++ LMA P ++ P TP+PR P PR+V S
Sbjct: 24 NASALSHRPYLMAVVAPPSLALPQPPQNPTPKPRRRP-PRDVAS 66
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = -2
Query: 395 HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSNSP 243
H+P+ AT ATA PAT AT P P P P S P
Sbjct: 28 HSPSTPAAATAT----ATATPATATATPATPPNPPAPPAAPPPTFSSSRPP 74
>05_06_0076 +
25381814-25381880,25382927-25382967,25383398-25383502,
25383612-25383695,25384069-25384103,25384562-25384647,
25385529-25385594,25385936-25385970
Length = 172
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 145 LIKSQSSRPQKLGINLKKDLHKHERELL*KQFHHVKH 35
L+K ++ + + + I DL + ERE L KQ H +H
Sbjct: 87 LVKPKNIKAKDIDIGRTSDLSRREREELEKQKSHERH 123
>04_04_0772 + 27970494-27972875
Length = 793
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -2
Query: 386 ANTEEMAATKKLMATAGPATVLATAP---ASTYTPRPRVLPT 270
A + A KL+ +G A ++ AP S PRP VLPT
Sbjct: 426 AGGDVSVAKAKLVLRSGAAGMIVIAPQVYGSVIVPRPHVLPT 467
>04_03_0712 + 18959770-18959930,18961115-18961238
Length = 94
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 344 TAGPATVL---ATAPASTYTPRPRVLPTPREVRSNSPRHLDNWVV 219
T+ PA +L A PA P PRV+ +P + PRH +N VV
Sbjct: 37 TSSPAALLRWGAPEPAPRLRP-PRVVASPEVGLHSHPRHEENLVV 80
>03_05_0742 + 27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = -3
Query: 118 QKLGINLKKDLHKHERELL*KQFHHVKH---TTDAR*FPSDT 2
Q++ KKD K EREL H H DA+ FP T
Sbjct: 908 QRIAFTRKKDFGKEERELKWAHAHRTLHGLQPPDAKPFPEKT 949
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -2
Query: 392 NPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSNSPRHLDNWVVSS 213
+P + E AA A P T + +A + + PTP + S SP H VVSS
Sbjct: 12 SPRRSPEAAAGGAGAAGDPPVTPMHSAAGDEWAAEEKRPPTPPQSSSASPPHSAAIVVSS 71
>04_03_0737 - 19152942-19154930
Length = 662
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 350 MATAGPATVLATAPASTYTPRPRVLPTPR 264
MAT PA++ A A A+T P PR + PR
Sbjct: 1 MATT-PASLAAAAAAATAAPEPRGIRPPR 28
>04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738
Length = 707
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 370 ISSVFAGLCYAEFASRVPKAGSGYNYSY 453
+S+ + CY F+ R+ +G G+N SY
Sbjct: 85 VSTPISSSCYNPFSKRMYSSGWGFNLSY 112
>04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,
1342225-1342799,1343596-1343703,1345823-1346155,
1346783-1349306
Length = 1630
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 176 SRRYVGAKKLIMTTTPPSCPDVLDYSTSPL 265
+RRY A+ ++ P S PDV+D +P+
Sbjct: 1328 TRRYDIARLQVLVLDPSSIPDVVDVEPAPM 1357
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 341 AGPATVLATAPASTYTPRPRVLPTPREVR 255
+ PA A A ++TP P +LP P+ V+
Sbjct: 121 SAPAAAHREAVAPSFTPPPPILPAPQPVQ 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,369,930
Number of Sequences: 37544
Number of extensions: 273024
Number of successful extensions: 988
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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