Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8g06
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 113 6e-26
AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical ... 98 3e-21
AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical ... 96 2e-20
AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid tr... 42 4e-04
AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical... 41 5e-04
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 40 0.001
U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid tran... 40 0.001
AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical ... 33 0.17
AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical ... 33 0.17
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 32 0.29
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 32 0.29
U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid tran... 30 1.2
U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 30 1.2
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 1.5
U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical p... 29 2.7
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 29 2.7
AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid tr... 29 2.7
AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid tr... 29 2.7
AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid tr... 29 2.7
AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical... 27 6.2
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 27 8.2
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 113 bits (273), Expect = 6e-26
Identities = 52/112 (46%), Positives = 68/112 (60%)
Frame = +1
Query: 190 RCKKIDYDDDTTQLSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVAISFLVAA 369
R K + + T L RCL FD YVL G+V + AGP++ +SFL+A
Sbjct: 12 RLKNLPAGEIATPLRRCLSTFDITLLGVGHMIGAGIYVLTGSVVRNTAGPSIILSFLLAG 71
Query: 370 ISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
+S+ + LCYAEF +R PKAGS Y Y+YV VGE AF IGWN+ILE+ +G A
Sbjct: 72 FASLLSALCYAEFGARFPKAGSAYTYTYVGVGELWAFVIGWNIILEHMLGAA 123
>AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical
protein B0454.6 protein.
Length = 585
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +1
Query: 172 IFATLRRCKKIDYDDDT-TQLSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVA 348
++ + R K+ + D + L RCLGL D YVL G V + AGP++
Sbjct: 5 VWQAITRKKRFEGDSHLDSNLRRCLGLMDITFLALGQMMGAGIYVLTGTVVRNQAGPSII 64
Query: 349 ISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
SF +A I+++ + YAEF +R P+AGS Y Y+Y+ GE AF +GW + LEY IG A
Sbjct: 65 FSFALAGIAALLSAFSYAEFGARFPRAGSAYTYTYIGFGELWAFIVGWTIPLEYMIGNA 123
>AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical
protein F23F1.6 protein.
Length = 583
Score = 95.9 bits (228), Expect = 2e-20
Identities = 42/101 (41%), Positives = 60/101 (59%)
Frame = +1
Query: 223 TQLSRCLGLFDXXXXXXXXXXXXXXYVLAGAVAKTVAGPAVAISFLVAAISSVFAGLCYA 402
+Q+ RCL + D YVL G+V + AGPA+ +SF+ + +++ + YA
Sbjct: 24 SQMKRCLTILDVMFIAIGHMIGAGIYVLTGSVVRNQAGPAIILSFIFSGFAALLSAFSYA 83
Query: 403 EFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILEYAIGTA 525
EF +R P+AGS Y YSYV +GE AF +GW + LEY IG A
Sbjct: 84 EFGARFPRAGSAYTYSYVGMGEIWAFIVGWTVPLEYMIGNA 124
>AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid
transporter protein 3 protein.
Length = 493
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 340 AVAISFLVAAISSVFAGL---CYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGW 492
+V +S +V +S +FAG+ CYAE + + K+G Y Y + G F+AF W
Sbjct: 63 SVGLSLIVWVLSGLFAGIGAFCYAELGTLIRKSGGDYAYIMEAFGPFLAFLRLW 116
>AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical
protein Y53F4B.12 protein.
Length = 721
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +1
Query: 328 VAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLILE 507
VAGP+ ++ + A + F+ +E + +PK Y+++Y +GE AF I W +++
Sbjct: 57 VAGPSTVLAPIFAFLIIFFSAAHLSELSCTMPKNCVQYHFAYAVIGELPAFVIAWISLVD 116
Query: 508 Y 510
Y
Sbjct: 117 Y 117
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 340 AVAISFLVAAISSVFAGL---CYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGW 492
+V +S +V IS +F + CYAE + + K+G Y Y + G F+AF W
Sbjct: 63 SVGLSLIVWLISGIFTAIGAYCYAELGTLIKKSGGDYAYIMEAFGPFVAFIRLW 116
>U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid
transporter protein 2 protein.
Length = 483
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 331 AGPAVAISFLVAAISSVFA---GLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGW 492
AG A +S L+ +S VFA +CY+E + +PK+G Y Y Y + G +F W
Sbjct: 48 AGSA-GMSLLIWLLSGVFAMIGAVCYSELGTLIPKSGGDYAYIYEAFGPLPSFLFLW 103
>AL117201-2|CAI79268.1| 527|Caenorhabditis elegans Hypothetical
protein Y53H1C.1b protein.
Length = 527
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVA-ISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFI 474
++ G V K +A + +L + S+ G+CY E + + G + Y+ E I
Sbjct: 39 FITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Query: 475 AFTIGW-NLILEYAIGTA 525
AF+ W +I+ + A
Sbjct: 99 AFSFMWVGVIMSFPASAA 116
>AL117201-1|CAB55063.1| 541|Caenorhabditis elegans Hypothetical
protein Y53H1C.1a protein.
Length = 541
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 298 YVLAGAVAKTVAGPAVA-ISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFI 474
++ G V K +A + +L + S+ G+CY E + + G + Y+ E I
Sbjct: 39 FITPGTVLKLALTNGMALVVWLGCGLISLIGGICYIELGTSIRDPGCDFAYNVYVGWEGI 98
Query: 475 AFTIGW-NLILEYAIGTA 525
AF+ W +I+ + A
Sbjct: 99 AFSFMWVGVIMSFPASAA 116
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -2
Query: 437 PEPAFGTLEANSA*HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREV 258
P P S +PA+T++M A ++++ P T T P S T + +P
Sbjct: 486 PSPNNANRVRRSTITSPADTQDMVAADQMLSNLDPTTTTTTIPKSATTANIQGIPRGARD 545
Query: 257 RS 252
RS
Sbjct: 546 RS 547
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -2
Query: 437 PEPAFGTLEANSA*HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREV 258
P P S +PA+T++M A ++++ P T T P S T + +P
Sbjct: 486 PSPNNANRVRRSTITSPADTQDMVAADQMLSNLDPTTTTTTIPKSATTANIQGIPRGARD 545
Query: 257 RS 252
RS
Sbjct: 546 RS 547
>U56963-7|AAQ01523.1| 526|Caenorhabditis elegans Amino acid
transporter protein 4 protein.
Length = 526
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 298 YVLAGAVAK-TVAGPAVAISFLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFI 474
++ G + + T + + ++ + S+ G+CY E + + G + Y+ E I
Sbjct: 39 FITPGPILQYTFSNGLALLVWIGCGLISLIGGICYIELGTSIHDPGCDFAYTVYVGWEGI 98
Query: 475 AFTIGW-NLILEYAIGTA 525
AF+ W +I+ + A
Sbjct: 99 AFSFMWVGVIMSFPASAA 116
>U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical
protein C54D2.1 protein.
Length = 373
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 335 PATVLATAPASTYTPRPRVLPTPREV 258
PATV TAP TP P TPR +
Sbjct: 126 PATVAPTAPTDLPTPAPEATTTPRRL 151
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = -2
Query: 380 TEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSNSPR 240
T + T + T T T P YTP P PR + +PR
Sbjct: 206 TPQPPCTPRTTTTTTTTTTTTTLPPCVYTPAPPATQPPRTYPTTTPR 252
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 380 TEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSNSPRHLDNWVVSSS 210
T E+ +T + T P T L T+ AST T P T S S + + V SSS
Sbjct: 413 TTEVTSTSSTVTTTEPTTTLTTSTASTSTTEP---STSTVTTSPSTSPVTSTVTSSS 466
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -2
Query: 380 TEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVRSNSPRHLDNWVVSSS 210
T E+ +T + T P T L T+ AST T P T S S + + V SSS
Sbjct: 413 TTEVTSTSSTVTTTEPTTTLTTSTASTSTTEP---STSTVTTSPSTSPVTSTVTSSS 466
>U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical
protein C37C3.2a protein.
Length = 436
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 169 YRSPSLKILIKSQSSRPQKLGINLKKDLHKHERELL*KQFHHVKHTTD 26
+R+ L+ + + ++ LG +++ +HKHE ELL K H +K D
Sbjct: 283 HRNLLLRFTLNDKKAQRYLLG-GVEQVIHKHEAELLSKSAHIIKSLYD 329
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 169 YRSPSLKILIKSQSSRPQKLGINLKKDLHKHERELL*KQFHHVKHTTD 26
+R+ L+ + + ++ LG +++ +HKHE ELL K H +K D
Sbjct: 283 HRNLLLRFTLNDKKAQRYLLG-GVEQVIHKHEAELLSKSAHIIKSLYD 329
>AF003144-7|AAV58876.1| 278|Caenorhabditis elegans Amino acid
transporter protein5, isoform c protein.
Length = 278
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 355 FLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLIL 504
+++ A+ ++ +CY E + + +AG + Y IAF W +L
Sbjct: 46 WVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSIAFAFMWVSVL 95
>AF003144-6|AAV58875.1| 521|Caenorhabditis elegans Amino acid
transporter protein5, isoform b protein.
Length = 521
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 355 FLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLIL 504
+++ A+ ++ +CY E + + +AG + Y IAF W +L
Sbjct: 46 WVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSIAFAFMWVSVL 95
>AF003144-5|AAV58874.1| 537|Caenorhabditis elegans Amino acid
transporter protein5, isoform a protein.
Length = 537
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 355 FLVAAISSVFAGLCYAEFASRVPKAGSGYNYSYVSVGEFIAFTIGWNLIL 504
+++ A+ ++ +CY E + + +AG + Y IAF W +L
Sbjct: 46 WVLCAVIAILGAICYIELGTSIREAGCDFAYICYVKWYSIAFAFMWVSVL 95
>AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical
protein Y39B6A.47 protein.
Length = 887
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 374 EMAATKKLMATAGPATVLATAPASTYTPRPRVLPTPREVR 255
E++A K L TAG T + + P+P +LPT VR
Sbjct: 407 EISAVKNLNTTAGARTCVIFP---IFAPKPNLLPTALSVR 443
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 416 LEANSA*HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPT 270
+E S H ++ E++A K + A A+ ++T+PA T TP P V T
Sbjct: 63 VEKVSESHLTSSAEKLAREKHV---AEAASTMSTSPAPTPTPEPVVTTT 108
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 416 LEANSA*HNPANTEEMAATKKLMATAGPATVLATAPASTYTPRPRVLPT 270
+E S H ++ E++A K + A A+ ++T+PA T TP P V T
Sbjct: 171 VEKVSESHLTSSAEKLAREKHV---AEAASTMSTSPAPTPTPEPVVTTT 216
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -2
Query: 389 PANTEEMAATKKLMATAGPATVLATAPASTYTPRPR---VLPTPREVRSNSPRHLDN 228
P +T + + T T AP +T T + + P P+ V NSP+ +D+
Sbjct: 203 PTSTPSTSTSTTTTTTTSTTTTTTEAPTTTTTIKTTTESIEPIPQTVTPNSPKIVDH 259
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 158 WAAVRSSRRYVGAKKLIMTTTPPSCPDVLDYSTSPL*ESGVPSV 289
WA V R + +T TP D++D+S PL +PSV
Sbjct: 489 WACVAEEIRALPTPTPTLTPTPELVEDLIDFSDEPL----IPSV 528
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,226,423
Number of Sequences: 27780
Number of extensions: 223796
Number of successful extensions: 825
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -