Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8f20
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 31 0.70
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 1.6
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 3.7
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 3.7
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 28 3.7
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 28 3.7
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 28 3.7
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 4.9
Z93380-6|CAB07602.2| 339|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81587-13|CAB04710.2| 339|Caenorhabditis elegans Hypothetical p... 27 6.5
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 27 6.5
U97196-8|AAB52457.3| 191|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 30.7 bits (66), Expect = 0.70
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +1
Query: 241 TTKKTESLDPLLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQSLLVIRCCGELVP 420
T + + +Q DS++ R E+L E ++ + SSQ LV R
Sbjct: 418 TNEIFSGISSFMQIRDSQIIPEEEEKLRKSRELLAETKANQEKKSSQKHLVERFSAN--- 474
Query: 421 EELPEQRTLLVQKIWSVLTERG 486
EEL EQ+ ++K+ +LTE G
Sbjct: 475 EELIEQKLTSIEKLHQLLTELG 496
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 221
C+NT +F C+ QC PQ L S C QC
Sbjct: 402 CQNTCQQFAPVCQQQCAPQCTLPSAPACQQC 432
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 316 TKRDIDEV---LDEIQSKNDITSSQSLLVIRCCGELVPEE 426
TK +I E D+IQSK+D+TS L RC +P E
Sbjct: 672 TKTEISEENPKTDDIQSKDDVTSKSELHCYRCEHYQLPAE 711
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 316 TKRDIDEV---LDEIQSKNDITSSQSLLVIRCCGELVPEE 426
TK +I E D+IQSK+D+TS L RC +P E
Sbjct: 669 TKTEISEENPKTDDIQSKDDVTSKSELHCYRCEHYQLPAE 708
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 221
C+NT ++ C+ QC PQ L S C QC
Sbjct: 262 CQNTCQQYAPVCQQQCAPQCTLPSAPACQQC 292
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 221
C+NT ++ C+ QC PQ L S C QC
Sbjct: 263 CQNTCQQYAPVCQQQCAPQCTLPSAPACQQC 293
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 221
C+NT ++ C+ QC PQ L S C QC
Sbjct: 178 CQNTCQQYAPVCQQQCTPQCTLPSAPACQQC 208
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 221
C+NT ++ C+ QC PQ L S C QC
Sbjct: 178 CQNTCQQYAPVCQQQCAPQCTLPSAPACQQC 208
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QC 221
C+NT ++ C+ QC PQ L S C QC
Sbjct: 178 CQNTCQQYAPVCQQQCTPQCTLPSAPACQQC 208
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 135 CKNTYFEFCENCRSQCIPQ--L*SLKCC*QCFCT 230
C+NT +F C+ QC PQ + S C QC T
Sbjct: 177 CQNTCQQFAPVCQQQCAPQCTISSAPQCQQCQTT 210
>Z93380-6|CAB07602.2| 339|Caenorhabditis elegans Hypothetical
protein F28C12.7 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 478 LLKHSIFSVQVRFFVLVALLGLVHHNIL*QEETV 377
LL+H+IFS R ++V LL V H E V
Sbjct: 53 LLRHNIFSNSTRLILIVCLLNSVVHQTTMMETRV 86
>Z81587-13|CAB04710.2| 339|Caenorhabditis elegans Hypothetical
protein F28C12.7 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 478 LLKHSIFSVQVRFFVLVALLGLVHHNIL*QEETV 377
LL+H+IFS R ++V LL V H E V
Sbjct: 53 LLRHNIFSNSTRLILIVCLLNSVVHQTTMMETRV 86
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 202 LSAANNVFVRDYATTKKTESLDPLLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDITSSQ 381
L + NN+ ++ KK E + L +K D + YG T + + +++S D SQ
Sbjct: 345 LDSENNLRRKERQAEKKKERVAVLQRKKDRKKNNYGATTVTNANAAESDLRSNYDEPFSQ 404
Query: 382 S 384
+
Sbjct: 405 N 405
>U97196-8|AAB52457.3| 191|Caenorhabditis elegans Hypothetical
protein B0207.2 protein.
Length = 191
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 232 DYATTKKTESLDPLLQKLDSEVRRYGRITKRDIDEVLDEIQSKNDIT 372
+ T+++T S+ K S + R+++E EI S+ND+T
Sbjct: 144 EQGTSEETRSVSDHAMKRLSTIAETSSYILRELEEPNSEINSRNDVT 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,126,525
Number of Sequences: 27780
Number of extensions: 218254
Number of successful extensions: 757
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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