Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8f20
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           25   0.65 
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           25   0.65 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   2.6  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   4.6  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   4.6  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   4.6  

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 427 LPEQRTLLVQKIWSVLTERGIAMDISHYNALLRVYIE 537
           L E++  LVQ  W+V+ +  +A  I+   A  + Y E
Sbjct: 24  LTERQKKLVQNTWAVVRKDEVASGIAVMTAFFKKYPE 60


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 427 LPEQRTLLVQKIWSVLTERGIAMDISHYNALLRVYIE 537
           L E++  LVQ  W+V+ +  +A  I+   A  + Y E
Sbjct: 24  LTERQKKLVQNTWAVVRKDEVASGIAVMTAFFKKYPE 60


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +1

Query: 322 RDIDEVLDEIQSKNDITSSQSLLVIRCCGELVPEELPEQ 438
           +D+D +   I+   D+T+      ++   +LVP    +Q
Sbjct: 88  KDVDPIFGTIKDLEDLTAEAKKQNLKVILDLVPNHTSDQ 126


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 319 KRDIDEVLDEIQSK 360
           K+ ++E+LDEI+ K
Sbjct: 120 KKSLEEILDEIKKK 133


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 319 KRDIDEVLDEIQSK 360
           K+ ++E+LDEI+ K
Sbjct: 120 KKSLEEILDEIKKK 133


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 319 KRDIDEVLDEIQSK 360
           K+ ++E+LDEI+ K
Sbjct: 120 KKSLEEILDEIKKK 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,628
Number of Sequences: 438
Number of extensions: 2716
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)