Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8f19
(564 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P56537 Cluster: Eukaryotic translation initiation facto... 256 3e-67
UniRef50_Q2UTN7 Cluster: Translation initiation factor 6; n=1; A... 217 1e-55
UniRef50_O62106 Cluster: Eukaryotic translation initiation facto... 213 3e-54
UniRef50_O22290 Cluster: Eukaryotic translation initiation facto... 197 1e-49
UniRef50_UPI0000D55B77 Cluster: PREDICTED: similar to CG17611-PA... 184 1e-45
UniRef50_Q8SS47 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTO... 158 7e-38
UniRef50_A2ET54 Cluster: Translation initiation factor eIF-6, pu... 153 3e-36
UniRef50_A2WNI2 Cluster: Putative uncharacterized protein; n=3; ... 140 2e-32
UniRef50_Q4TAX3 Cluster: Chromosome undetermined SCAF7240, whole... 119 4e-26
UniRef50_A6QRE5 Cluster: Integrin beta 4 binding protein; n=4; E... 115 7e-25
UniRef50_Q98RM8 Cluster: Translation initiation factor eIF6; n=1... 100 2e-20
UniRef50_Q9UYI6 Cluster: Translation initiation factor 6; n=4; T... 89 5e-17
UniRef50_Q18EU8 Cluster: Translation initiation factor 6; n=5; H... 87 3e-16
UniRef50_Q9YD27 Cluster: Translation initiation factor 6; n=1; A... 87 4e-16
UniRef50_Q702B7 Cluster: Putative translation initiation factor ... 85 1e-15
UniRef50_Q8PYQ3 Cluster: Translation initiation factor 6; n=3; M... 85 1e-15
UniRef50_O27648 Cluster: Translation initiation factor 6; n=1; M... 81 1e-14
UniRef50_Q60357 Cluster: Translation initiation factor 6; n=6; M... 81 1e-14
UniRef50_Q46FA1 Cluster: Translation initiation factor 6; n=3; E... 79 5e-14
UniRef50_Q2NGQ7 Cluster: Translation initiation factor 6; n=1; M... 79 9e-14
UniRef50_UPI00015BAD98 Cluster: translation initiation factor 6 ... 75 9e-13
UniRef50_A5UL31 Cluster: Translation initiation factor 6; n=1; M... 74 2e-12
UniRef50_Q2FS97 Cluster: Translation initiation factor 6; n=2; M... 73 5e-12
UniRef50_A2BN57 Cluster: Translation initiation factor 6; n=1; H... 72 8e-12
UniRef50_A1RXF3 Cluster: Putative translation initiation factor ... 69 1e-10
UniRef50_Q8TUY5 Cluster: Translation initiation factor 6; n=1; M... 69 1e-10
UniRef50_A2STI7 Cluster: Putative translation initiation factor ... 66 4e-10
UniRef50_Q6L2L0 Cluster: Translation initiation factor 6; n=3; T... 66 5e-10
UniRef50_Q8ZTU1 Cluster: Translation initiation factor 6; n=5; T... 64 2e-09
UniRef50_A0RYC3 Cluster: Translation initiation factor; n=2; The... 64 3e-09
UniRef50_A3DNH5 Cluster: Putative translation initiation factor ... 60 5e-08
UniRef50_Q971I4 Cluster: Translation initiation factor 6; n=4; S... 59 8e-08
UniRef50_Q97CU0 Cluster: Translation initiation factor 6; n=1; T... 56 4e-07
UniRef50_Q9P9D7 Cluster: Translation initiatin factor 6; n=1; un... 54 3e-06
UniRef50_Q29281 Cluster: Orf protein; n=1; Sus scrofa|Rep: Orf p... 48 2e-04
UniRef50_A2ZIH4 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q3LWK6 Cluster: Elongation initiation factor 6; n=1; Bi... 43 0.004
UniRef50_Q3K821 Cluster: Putative uncharacterized protein; n=1; ... 37 0.28
UniRef50_Q18WJ5 Cluster: Hydantoinase/oxoprolinase; n=2; Desulfi... 36 0.65
UniRef50_A6PT32 Cluster: Putative uncharacterized protein precur... 36 0.65
UniRef50_Q8MKI9 Cluster: Brca2 protein; n=8; Eukaryota|Rep: Brca... 34 2.0
UniRef50_Q19Q26 Cluster: CG1648-like; n=1; Belgica antarctica|Re... 34 2.6
UniRef50_A7TSX1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A0RV31 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q9V4E6 Cluster: CG1901-PA, isoform A; n=4; Sophophora|R... 33 3.5
UniRef50_Q24HL4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q864S8 Cluster: Breast cancer type 2 susceptibility pro... 33 3.5
UniRef50_UPI0000E47861 Cluster: PREDICTED: hypothetical protein,... 33 6.1
UniRef50_A6WWT2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A7PKY5 Cluster: Chromosome chr7 scaffold_20, whole geno... 33 6.1
UniRef50_Q30V10 Cluster: Pyridoxal phosphate-dependent enzyme ap... 32 8.1
UniRef50_Q1MFY0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_Q0S1G3 Cluster: Oxidoreductase; n=42; Bacteria|Rep: Oxi... 32 8.1
UniRef50_Q00V96 Cluster: Sulfolipid synthase; n=2; Ostreococcus|... 32 8.1
>UniRef50_P56537 Cluster: Eukaryotic translation initiation factor 6
(eIF-6) (B4 integrin interactor) (CAB) (p27(BBP))
(B(2)GCN homolog); n=62; Eukaryota|Rep: Eukaryotic
translation initiation factor 6 (eIF-6) (B4 integrin
interactor) (CAB) (p27(BBP)) (B(2)GCN homolog) - Homo
sapiens (Human)
Length = 245
Score = 256 bits (627), Expect = 3e-67
Identities = 118/150 (78%), Positives = 135/150 (90%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
MAVR FENN E+G F+KLTNTYCLVAIGGSENFYSVFE EL++TIPV+HAS+ GCRIIG
Sbjct: 1 MAVRASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIG 60
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
RM VGN++GLLVP++TTD ELQHIRNSLP+ V+++RVEERLSALGNV CNDYVALVHPD
Sbjct: 61 RMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPD 120
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
LD++TEEILAD L VEVFRQT+A VLVGS
Sbjct: 121 LDRETEEILADVLKVEVFRQTVADQVLVGS 150
>UniRef50_Q2UTN7 Cluster: Translation initiation factor 6; n=1;
Aspergillus oryzae|Rep: Translation initiation factor 6
- Aspergillus oryzae
Length = 272
Score = 217 bits (530), Expect = 1e-55
Identities = 107/175 (61%), Positives = 134/175 (76%), Gaps = 25/175 (14%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
MAVR QFEN+NEVGVF++LTN+Y +VAIG SENFYSVFEAEL + IP+ HA++ G RI+G
Sbjct: 1 MAVRAQFENSNEVGVFARLTNSYAVVAIGASENFYSVFEAELQDVIPICHATIAGTRIVG 60
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
R+T GN+ GLLVP++TTD ELQH+RN+LP++VK+QR+EERLSALGNVI CND+VAL+HPD
Sbjct: 61 RLTAGNRKGLLVPTTTTDQELQHLRNTLPDSVKIQRIEERLSALGNVICCNDHVALIHPD 120
Query: 473 LDKDTEEI-------------------------LADTLNVEVFRQTIAGNVLVGS 562
L+++TEE+ +AD L VEVFRQTIA NVL GS
Sbjct: 121 LERETEEMYYPHHHHCFLITIWHGMKVLTIFTSIADVLGVEVFRQTIADNVLTGS 175
>UniRef50_O62106 Cluster: Eukaryotic translation initiation factor
6; n=38; Eukaryota|Rep: Eukaryotic translation
initiation factor 6 - Caenorhabditis elegans
Length = 246
Score = 213 bits (519), Expect = 3e-54
Identities = 93/150 (62%), Positives = 126/150 (84%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
MA+RV +E +N+VGVF LTN+YCLV +GG++NFYS+ EAEL++ IPV+H S+ RI+G
Sbjct: 1 MALRVDYEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVG 60
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
R+TVGN++GLLVP++TTD ELQH+RNSLP+ V ++RV+ERLSALGNVIACND+VA+VH +
Sbjct: 61 RLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAE 120
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+ +TE+ L + L VEVFR ++A N LVGS
Sbjct: 121 ISAETEQALVEVLKVEVFRVSLAQNSLVGS 150
>UniRef50_O22290 Cluster: Eukaryotic translation initiation factor
6; n=20; Eukaryota|Rep: Eukaryotic translation
initiation factor 6 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 247
Score = 197 bits (481), Expect = 1e-49
Identities = 94/152 (61%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
Frame = +2
Query: 113 MAVRVQFENNN-EVGVFSKLTNTYCLV-AIGGSENFYSVFEAELAETIPVIHASVGGCRI 286
MA R+Q++NNN E+GVFSKLTN YCLV A S NF++ +E++L IP++ S+GG
Sbjct: 1 MATRLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGT 60
Query: 287 IGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVH 466
IG + VGNKNGLL+ + TD ELQH+R+SLP+ V +QR+EE + ALGN IACNDYVALVH
Sbjct: 61 IGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVH 120
Query: 467 PDLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
P L+KDTEEI++D L VEV+RQTIA N LVGS
Sbjct: 121 PKLEKDTEEIISDVLGVEVYRQTIANNELVGS 152
>UniRef50_UPI0000D55B77 Cluster: PREDICTED: similar to CG17611-PA;
n=2; Tribolium castaneum|Rep: PREDICTED: similar to
CG17611-PA - Tribolium castaneum
Length = 290
Score = 184 bits (449), Expect = 1e-45
Identities = 85/153 (55%), Positives = 117/153 (76%), Gaps = 4/153 (2%)
Frame = +2
Query: 116 AVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYS----VFEAELAETIPVIHASVGGCR 283
A R+Q+ N+NE+G F +LTN+YCL+ GG Y + +++L E IP I+ S+ GC+
Sbjct: 64 AFRIQYGNSNEIGAFIRLTNSYCLM--GGEPQQYEKIQRIIQSDLGE-IPAINTSLAGCK 120
Query: 284 IIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALV 463
++GR+ VGNKNGLLVP T DTELQ ++ LPE++K+ ++E++LSALGNVI CND VAL+
Sbjct: 121 VVGRLCVGNKNGLLVPELTYDTELQRLKEELPESLKISKIEDKLSALGNVIVCNDSVALI 180
Query: 464 HPDLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
HPDLD++TEE++ADTL VEVFR I+ N LVGS
Sbjct: 181 HPDLDRETEEVIADTLQVEVFRHMISNNPLVGS 213
>UniRef50_Q8SS47 Cluster: EUKARYOTIC TRANSLATION INITIATION FACTOR
6; n=1; Encephalitozoon cuniculi|Rep: EUKARYOTIC
TRANSLATION INITIATION FACTOR 6 - Encephalitozoon
cuniculi
Length = 248
Score = 158 bits (384), Expect = 7e-38
Identities = 69/150 (46%), Positives = 104/150 (69%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M+ R+ FE ++E+G + LTNTYC++ S N + +A IP++ ++ R +G
Sbjct: 8 MSYRIDFEGSSEIGAYMSLTNTYCVIGRSQSNNVLKFLQENVA--IPIVETTINSIRSVG 65
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
GN++GLLVP + TD E+ HIRNSLPE+V ++R+EERL+ALGNVI CND++A++H D
Sbjct: 66 SQCRGNRHGLLVPHTITDQEIMHIRNSLPEDVVVRRIEERLNALGNVILCNDHIAIIHGD 125
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
LDK++E+++ D L V V+RQ I LVG+
Sbjct: 126 LDKESEDLIRDVLQVHVYRQNIGQEPLVGT 155
>UniRef50_A2ET54 Cluster: Translation initiation factor eIF-6,
putative family protein; n=1; Trichomonas vaginalis
G3|Rep: Translation initiation factor eIF-6, putative
family protein - Trichomonas vaginalis G3
Length = 284
Score = 153 bits (371), Expect = 3e-36
Identities = 70/151 (46%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELA-ETIPVIHASVGGCRII 289
M R ++++++EVG ++ LT+TYCL+ ++++ F+ ++ +++ G I+
Sbjct: 1 MVSRCKYQSSSEVGAYATLTDTYCLLPTTTTKSWTETFDVLTDFNNTTLVMSNIAGTPIV 60
Query: 290 GRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHP 469
GR+TVGNKNGLLVP +TTD+EL I SLP+ V ++R+EE+ SALGNVI+CND++AL+HP
Sbjct: 61 GRLTVGNKNGLLVPLTTTDSELAQIEQSLPDGVVVERIEEKFSALGNVISCNDHIALIHP 120
Query: 470 DLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+LD++T EI+ D L V+VF IA LVGS
Sbjct: 121 ELDQETVEIIKDVLQVDVFPTLIANESLVGS 151
>UniRef50_A2WNI2 Cluster: Putative uncharacterized protein; n=3;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 214
Score = 140 bits (339), Expect = 2e-32
Identities = 70/147 (47%), Positives = 101/147 (68%), Gaps = 12/147 (8%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
MA RV+FEN++E+GVF++LTN YC++ GG+ENF+SVFE+ELA+ +PV+ S+GG RIIG
Sbjct: 1 MASRVRFENSSEIGVFARLTNAYCVLPDGGAENFFSVFESELADVVPVVRTSIGGTRIIG 60
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEE-------RLSALGNVI----- 436
RM VGNKNGLL+P +TTD ELQH++NSLP+ + + + R + GN++
Sbjct: 61 RMCVGNKNGLLLPHTTTDQELQHLKNSLPDQGTEEIISDVLGVEVFRQTIAGNILVGSFC 120
Query: 437 ACNDYVALVHPDLDKDTEEILADTLNV 517
A ++ LVHP + + L+ L V
Sbjct: 121 AFSNKGGLVHPQTSVEDQAELSTLLEV 147
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +2
Query: 476 DKDTEEILADTLNVEVFRQTIAGNVLVGS 562
D+ TEEI++D L VEVFRQTIAGN+LVGS
Sbjct: 90 DQGTEEIISDVLGVEVFRQTIAGNILVGS 118
>UniRef50_Q4TAX3 Cluster: Chromosome undetermined SCAF7240, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7240,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 285
Score = 119 bits (287), Expect = 4e-26
Identities = 53/65 (81%), Positives = 58/65 (89%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
MAVR FE NNE+G F+KLTNTYCLVAIGGSENFYSVFE EL+ETIPV+HAS+ GCRIIG
Sbjct: 1 MAVRASFEKNNEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSETIPVVHASIAGCRIIG 60
Query: 293 RMTVG 307
RM VG
Sbjct: 61 RMCVG 65
>UniRef50_A6QRE5 Cluster: Integrin beta 4 binding protein; n=4;
Euarchontoglires|Rep: Integrin beta 4 binding protein -
Mus musculus (Mouse)
Length = 81
Score = 115 bits (277), Expect = 7e-25
Identities = 52/69 (75%), Positives = 57/69 (82%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
MAVR FENN EVG F+KLTN YCLVAIGGSENFYSVFE EL++ IPV+HAS+ GCRIIG
Sbjct: 1 MAVRASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIG 60
Query: 293 RMTVGNKNG 319
RM VG G
Sbjct: 61 RMCVGKAGG 69
>UniRef50_Q98RM8 Cluster: Translation initiation factor eIF6; n=1;
Guillardia theta|Rep: Translation initiation factor eIF6
- Guillardia theta (Cryptomonas phi)
Length = 228
Score = 100 bits (240), Expect = 2e-20
Identities = 46/150 (30%), Positives = 86/150 (57%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M +++ ++G + LTN+YC+V + Y++ ++EL I +I +V +G
Sbjct: 1 MTIKLNLYGKEDIGNYILLTNSYCIVPHDINSKNYNIIKSELDNKINIICTNVSESICVG 60
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
+ +GN GL+VP++ T E + N LPE V +++ E L+ LGN++A N+ L PD
Sbjct: 61 NLLIGNSKGLIVPNTITFHEQNELLNFLPEKVLVKKFNENLTNLGNLLAHNELYGLSSPD 120
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
L + + E+++D L VE+ + T+ ++G+
Sbjct: 121 LSQSSCELISDVLGVEILKLTLGEEKMIGT 150
Score = 32.3 bits (70), Expect = 8.1
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 164 KLTNTYCLVAIGGS--ENFYSVFEA-ELAET--IPVIHASVG-GCRIIGRMTVGNKNGLL 325
K+ TYC I G + F S+ + EL E +P I +V GC +G+ V N N +
Sbjct: 146 KMIGTYCKFNINGGIVQPFLSIEDHDELVEITGVPFIGGTVNSGCSNVGKGIVCNDNLVF 205
Query: 326 VPSSTTDTELQHIRNSLPENVK 391
T TE+ HI N++ + K
Sbjct: 206 CGYKTNQTEM-HIINNIMKKSK 226
>UniRef50_Q9UYI6 Cluster: Translation initiation factor 6; n=4;
Thermococcaceae|Rep: Translation initiation factor 6 -
Pyrococcus abyssi
Length = 227
Score = 89.4 bits (212), Expect = 5e-17
Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +2
Query: 122 RVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMT 301
R+ FEN+ +GVF T+ LV G E V L +PVI AS+ RIIG +
Sbjct: 5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLA 62
Query: 302 VGNKNGLLVPSSTTDTELQHIRNSLPE---NVKLQRVEERLSALGNVIACNDYVALVHPD 472
GN N +LVP DTE++ I+++ E ++ + +ALGN+I ND ALV
Sbjct: 63 TGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAK 122
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+D + + D L VEV R IAG VGS
Sbjct: 123 FSRDEAKEIGDILGVEVERGLIAGLHAVGS 152
>UniRef50_Q18EU8 Cluster: Translation initiation factor 6; n=5;
Halobacteriaceae|Rep: Translation initiation factor 6 -
Haloquadratum walsbyi (strain DSM 16790)
Length = 226
Score = 87.0 bits (206), Expect = 3e-16
Identities = 51/148 (34%), Positives = 78/148 (52%)
Frame = +2
Query: 119 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 298
+R F + VGVF++ T+ L+ ++ AEL IP + ++GG +G +
Sbjct: 2 LRASFAGSPYVGVFARATDDVLLLRSDVDDDTADAMAAEL--DIPAVATTIGGSGTVGAL 59
Query: 299 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 478
GN+NG+LV S+ T E + I + +V + + R++A GNVI NDY A VHPDL
Sbjct: 60 ATGNENGILVTSNVTMREKEAIETTA--SVSVTELPGRINAAGNVILANDYGAYVHPDLS 117
Query: 479 KDTEEILADTLNVEVFRQTIAGNVLVGS 562
+ E + LNV V R +A VG+
Sbjct: 118 TEAVESIESALNVPVARGKLADVRTVGT 145
>UniRef50_Q9YD27 Cluster: Translation initiation factor 6; n=1;
Aeropyrum pernix|Rep: Translation initiation factor 6 -
Aeropyrum pernix
Length = 233
Score = 86.6 bits (205), Expect = 4e-16
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +2
Query: 122 RVQFENNNEVGVFSKLTNTYCLVAIG-GSENFYSVFEAELAETIPVIHASVGGCRIIGRM 298
++ N +GV+ +++Y L G+++ ++ E V+ V G R++G +
Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVL 70
Query: 299 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 478
T GN G+L+P D E++ +R +L E V++ V R +ALGNVI CND L P L+
Sbjct: 71 TTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLE 128
Query: 479 KDTEEILADTLNVEVFRQTIAGNVLVGS 562
K+ + ++DTL VEV ++AG VGS
Sbjct: 129 KEALKTVSDTLGVEVVEGSVAGVYTVGS 156
>UniRef50_Q702B7 Cluster: Putative translation initiation factor 6;
n=1; uncultured crenarchaeote|Rep: Putative translation
initiation factor 6 - uncultured crenarchaeote
Length = 221
Score = 85.0 bits (201), Expect = 1e-15
Identities = 44/138 (31%), Positives = 82/138 (59%)
Frame = +2
Query: 149 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLV 328
VG+F++ + L+ G ++ + E + +IH S+ G R+IG MTV N NG+L+
Sbjct: 14 VGLFTRTNDKTLLLPFGFADTKTKKLK-EYLDVEEIIHVSIAGTRLIGPMTVMNNNGILL 72
Query: 329 PSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILADT 508
PS+ +D E+Q ++ + + ++R+ + +A+GN+I+ ND A+V ++ ++ + DT
Sbjct: 73 PSTVSDEEIQILKQT---GLNVERLNSKFTAIGNLISANDKGAIVSNLFSEEVDQDIKDT 129
Query: 509 LNVEVFRQTIAGNVLVGS 562
L V + + +I G V VGS
Sbjct: 130 LGVPIQKMSIGGFVQVGS 147
>UniRef50_Q8PYQ3 Cluster: Translation initiation factor 6; n=3;
Methanosarcinaceae|Rep: Translation initiation factor 6
- Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 84.6 bits (200), Expect = 1e-15
Identities = 50/145 (34%), Positives = 78/145 (53%)
Frame = +2
Query: 125 VQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTV 304
V + + +GVF+ T LV ++ E L + V+ + G ++G ++
Sbjct: 5 VDIYDTSIIGVFATCTEDLALVPPLTKPEVCTILEEAL--DVRVVETLINGSTVVGALSR 62
Query: 305 GNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKD 484
GN NG L+P ++ E+Q R +P + + +RL+A+GN++ ND ALVHP+L
Sbjct: 63 GNSNGFLLPYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDR 117
Query: 485 TEEILADTLNVEVFRQTIAGNVLVG 559
EI+A TL VEV+R TIAG VG
Sbjct: 118 ALEIIARTLKVEVYRGTIAGIKNVG 142
>UniRef50_O27648 Cluster: Translation initiation factor 6; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Translation initiation factor 6 - Methanobacterium
thermoautotrophicum
Length = 222
Score = 81.4 bits (192), Expect = 1e-14
Identities = 46/150 (30%), Positives = 76/150 (50%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M R+ N +GV+ +T++ L+ E F V L + V+ S+ G + G
Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNG 58
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
+ VGN NG +V + D E+ + + V+ R+ ER +A+GN++ ND A+ P
Sbjct: 59 ALAVGNSNGFVVSNQAMDREIDALAAA---GVEAVRIPERFTAVGNLVLANDNGAVASPL 115
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
L D +++ D L V+V T+AG +VGS
Sbjct: 116 LSDDALQVIGDVLEVDVKVSTLAGLNIVGS 145
Score = 33.5 bits (73), Expect = 3.5
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +2
Query: 143 NEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGL 322
N VG TN L+ S + E L V + G +IG +V N NG+
Sbjct: 141 NIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVN-HGVTLIGACSVANSNGV 199
Query: 323 LVPSSTTDTELQHIRNSL 376
LV TT EL I +L
Sbjct: 200 LVGEETTGPELARIEEAL 217
>UniRef50_Q60357 Cluster: Translation initiation factor 6; n=6;
Methanococcales|Rep: Translation initiation factor 6 -
Methanococcus jannaschii
Length = 228
Score = 81.4 bits (192), Expect = 1e-14
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M +R F +GV + T L+ I ++ + +E+ ET + ++GG ++G
Sbjct: 3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVNEV-SEVLET-KCLQTNIGGSSLVG 60
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPEN---VKLQRVEERLSALGNVIACNDYVALV 463
++V NK GLL+P D EL I+N L EN + ++ ++ + +ALGN+I ND AL+
Sbjct: 61 SLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALI 120
Query: 464 HPDLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
P+L KD ++ + D+LNVEV TIA VGS
Sbjct: 121 SPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGS 152
>UniRef50_Q46FA1 Cluster: Translation initiation factor 6; n=3;
Euryarchaeota|Rep: Translation initiation factor 6 -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 219
Score = 79.4 bits (187), Expect = 5e-14
Identities = 48/137 (35%), Positives = 71/137 (51%)
Frame = +2
Query: 149 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLV 328
+GVF+ T LV G ++ E L I + V G +IG ++ GN NG L
Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLDARI--VETLVNGSVVIGALSRGNSNGFLY 70
Query: 329 PSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILADT 508
T E++ + V+ + + +L+A+GN++ ND ALVHP+L E++A T
Sbjct: 71 SYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIAST 125
Query: 509 LNVEVFRQTIAGNVLVG 559
L VEV+R TIAG VG
Sbjct: 126 LKVEVYRGTIAGIKNVG 142
>UniRef50_Q2NGQ7 Cluster: Translation initiation factor 6; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Translation
initiation factor 6 - Methanosphaera stadtmanae (strain
DSM 3091)
Length = 224
Score = 78.6 bits (185), Expect = 9e-14
Identities = 44/150 (29%), Positives = 78/150 (52%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M + + N +GV + +V+ G +++ + L +P+I + G + G
Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETL--NVPIIKTPICGSNLAG 58
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
+ GN NGLL+ EL +R ++ ++ + ++L+A+GN+I ND ALV+P
Sbjct: 59 ALMAGNSNGLLISPYVFSHELDVLRE---HDINVEIMPDKLTAIGNIIVANDNGALVNPS 115
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
L + + I+ +TL VEV +IAG +VGS
Sbjct: 116 LSDEAKRIIKNTLEVEVVETSIAGLDIVGS 145
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 287 IGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVH 466
IG + V N NG LV S +D + I+N+L V ++ L +G+++A + ALVH
Sbjct: 99 IGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEV-VETSIAGLDIVGSLVAATNRGALVH 157
Query: 467 PDLDKDTEEILADTLNVEVFRQTI-AGNVLVGS 562
PD ++ +++ D L V T+ G LVG+
Sbjct: 158 PDASEEELDLVEDVLGVPAEIGTVNRGVKLVGA 190
>UniRef50_UPI00015BAD98 Cluster: translation initiation factor 6
(aeIF-6); n=1; Ignicoccus hospitalis KIN4/I|Rep:
translation initiation factor 6 (aeIF-6) - Ignicoccus
hospitalis KIN4/I
Length = 223
Score = 75.4 bits (177), Expect = 9e-13
Identities = 47/148 (31%), Positives = 76/148 (51%)
Frame = +2
Query: 119 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 298
V + N +GV+ + + L+ G E+ E+ L T V+ A V ++G
Sbjct: 6 VPISIFGNPNIGVYMFANDDFALIPPGVKEDVVKKVESALKVT--VVEAKVADSTLLGLF 63
Query: 299 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 478
GN + L+VPS + EL++++ L +K+ V +L+A+GNVI CND AL HP++
Sbjct: 64 VNGNNHALVVPSIIKEYELENLKRELDLPIKV--VYSKLTAMGNVILCNDKFALFHPEMS 121
Query: 479 KDTEEILADTLNVEVFRQTIAGNVLVGS 562
+++ + L V TIAG VGS
Sbjct: 122 NWVKDV-TEVLGVPGETGTIAGVPTVGS 148
>UniRef50_A5UL31 Cluster: Translation initiation factor 6; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Translation
initiation factor 6 - Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861)
Length = 223
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/150 (26%), Positives = 75/150 (50%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M R+ +N +GVF T+ +V + + E L + + +S+ GC +IG
Sbjct: 1 MLRRINIVDNPNIGVFILATDDLAVVPYNLLDEKVKLIEETLE--VDAVKSSISGCNLIG 58
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
+ V N NG++V D E++ + + + +A+GN++A ND A+V P
Sbjct: 59 SLAVANSNGIVVSPHVLDREVKQFEEL---GLNVATIPGNYTAVGNIVAANDTGAIVSPF 115
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
L + +++ DTL+V V ++ G+ ++GS
Sbjct: 116 LSDEAVKVIEDTLDVNVESTSMVGSDIIGS 145
>UniRef50_Q2FS97 Cluster: Translation initiation factor 6; n=2;
Methanomicrobiales|Rep: Translation initiation factor 6
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 221
Score = 72.9 bits (171), Expect = 5e-12
Identities = 43/145 (29%), Positives = 75/145 (51%)
Frame = +2
Query: 125 VQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTV 304
V + +GVF+++ + +V E + +E L + ++ ++ IIG + V
Sbjct: 5 VSIAGDPHIGVFTRVFDDIAVVPPDVPEEVTTRYEEALK--VEIVRTTIQRSPIIGSLLV 62
Query: 305 GNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKD 484
GN NGL++ T+ E+ +L E L +EE ++A GN+I ND+ A VHP++D++
Sbjct: 63 GNNNGLVITGMATEEEIA----TLSEYRDLMLLEEGMNAAGNIILANDHFAAVHPEMDEE 118
Query: 485 TEEILADTLNVEVFRQTIAGNVLVG 559
+ L+D L V V T+ VG
Sbjct: 119 FMDALSDFLKVPVIPLTLGDVKTVG 143
>UniRef50_A2BN57 Cluster: Translation initiation factor 6; n=1;
Hyperthermus butylicus DSM 5456|Rep: Translation
initiation factor 6 - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 225
Score = 72.1 bits (169), Expect = 8e-12
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +2
Query: 140 NNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNG 319
N +GV+ N LV +E E L + VI + I G M GN NG
Sbjct: 10 NPNIGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNG 67
Query: 320 LLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEIL 499
LL+P EL ++R + + V+L+ +E R +ALGN+IA N+ ALV P +DK + +
Sbjct: 68 LLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKI 127
Query: 500 ADTLNVE-VFRQTIAGNVLVGS 562
L VE ++++ +A VGS
Sbjct: 128 KSVLGVETIYQRHLANIPTVGS 149
>UniRef50_A1RXF3 Cluster: Putative translation initiation factor
eIF-6; n=1; Thermofilum pendens Hrk 5|Rep: Putative
translation initiation factor eIF-6 - Thermofilum
pendens (strain Hrk 5)
Length = 223
Score = 68.5 bits (160), Expect = 1e-10
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 149 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPV--IHASVGGCRIIGRMTVGNKNGL 322
+GV+ + + L+ E + ++AE + V SV G R++G GN NGL
Sbjct: 15 IGVYIFANDRFALIPYDAPEKL----DRKIAENLSVDAFRVSVAGTRLVGIFLAGNNNGL 70
Query: 323 LVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILA 502
+VP D+EL+H+++ L N+ + + R + +GN++ ND + L K + +A
Sbjct: 71 VVPRVILDSELEHLKSLLDVNIVVLE-DVRETGIGNLVLANDNGCVASQILPKSAVDRIA 129
Query: 503 DTLNVEVFRQTIAGNVLVGS 562
D L VE + +I VGS
Sbjct: 130 DALGVECIQMSIGDVPFVGS 149
>UniRef50_Q8TUY5 Cluster: Translation initiation factor 6; n=1;
Methanopyrus kandleri|Rep: Translation initiation factor
6 - Methanopyrus kandleri
Length = 221
Score = 68.5 bits (160), Expect = 1e-10
Identities = 40/148 (27%), Positives = 72/148 (48%)
Frame = +2
Query: 119 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRM 298
V+ + +G + + Y +VA ++ V + A + V+ +V G ++G +
Sbjct: 4 VKASVHGDPNIGAWIAASEEYAVVAPKVPDDI--VERVKEALDVEVVRTTVAGSNLVGAL 61
Query: 299 TVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLD 478
N NG L P + E++ +R V++ + +++A+GN++ ND+ ALVHPDLD
Sbjct: 62 LAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLD 118
Query: 479 KDTEEILADTLNVEVFRQTIAGNVLVGS 562
E++ L V R + G VGS
Sbjct: 119 DHALEVIESVLGGRVVRGELGGVKTVGS 146
>UniRef50_A2STI7 Cluster: Putative translation initiation factor
eIF-6; n=2; Methanomicrobiales|Rep: Putative translation
initiation factor eIF-6 - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 222
Score = 66.5 bits (155), Expect = 4e-10
Identities = 42/137 (30%), Positives = 66/137 (48%)
Frame = +2
Query: 149 VGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLV 328
+GV++++ +V + + F L + VI V G +IG + GN G +V
Sbjct: 13 IGVYARVFEDLAVVPVEAPKEFRDKIAEAL--DVEVIETFVQGSSVIGLLLTGNSRGFVV 70
Query: 329 PSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILADT 508
D+EL+ L E + E ++A GNVI ND A+VHPD+ E++AD
Sbjct: 71 SGLIQDSELE----ILQEYGDCLLLGEEMNAAGNVILTNDSFAVVHPDMSSAMREMVADF 126
Query: 509 LNVEVFRQTIAGNVLVG 559
L V++ + AG VG
Sbjct: 127 LKVKIIPMSFAGVGTVG 143
>UniRef50_Q6L2L0 Cluster: Translation initiation factor 6; n=3;
Thermoplasmatales|Rep: Translation initiation factor 6 -
Picrophilus torridus
Length = 217
Score = 66.1 bits (154), Expect = 5e-10
Identities = 42/150 (28%), Positives = 72/150 (48%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M +V N+N +GV+++ N + + S+ +FE L + I S+G +IG
Sbjct: 1 MIKKVSILNSNFIGVYARTWNDVTFLPVNISDEEKRIFEETLKTEVYKI--SIGNSFLIG 58
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
M N NG++V D + ++++ + + +L+A GN I ND+ AL+H
Sbjct: 59 SMLSMNSNGIVV----ADHGIDNLKSLNINGRNILSINNKLNAAGNNIIANDHAALIHKS 114
Query: 473 LDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+ + D L VE + +IAG VGS
Sbjct: 115 FPDSIRKKIEDVLGVETVKGSIAGIKTVGS 144
Score = 33.5 bits (73), Expect = 3.5
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 248 IPVIHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALG 427
+ + S+ G + +G + V N G+LV S + E++++ + NVK + +G
Sbjct: 129 VETVKGSIAGIKTVGSVAVLNDRGMLVTSEADEDEIKYLSDLFKINVKTGTANFGSNYVG 188
Query: 428 NVIACNDYVALV 463
I N LV
Sbjct: 189 ASIIANSNGILV 200
>UniRef50_Q8ZTU1 Cluster: Translation initiation factor 6; n=5;
Thermoproteaceae|Rep: Translation initiation factor 6 -
Pyrobaculum aerophilum
Length = 220
Score = 64.5 bits (150), Expect = 2e-09
Identities = 44/140 (31%), Positives = 70/140 (50%)
Frame = +2
Query: 143 NEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGL 322
+ +GVF NT + E L + V +V ++G TV N NG+
Sbjct: 13 SSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRTS--VARFTVARSPLLGIFTVVNDNGV 70
Query: 323 LVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPDLDKDTEEILA 502
L+P + E++ + +L NV + + + +A+ N+I + VALV P L+ +++A
Sbjct: 71 LLPPLVLEEEVRLFK-ALGLNVDI--INTKYTAISNLILAGNKVALVSPLLEPSARKVVA 127
Query: 503 DTLNVEVFRQTIAGNVLVGS 562
D L VEV TIAGN LVG+
Sbjct: 128 DVLGVEVIVDTIAGNPLVGA 147
>UniRef50_A0RYC3 Cluster: Translation initiation factor; n=2;
Thermoprotei|Rep: Translation initiation factor -
Cenarchaeum symbiosum
Length = 221
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/102 (31%), Positives = 61/102 (59%)
Frame = +2
Query: 257 IHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVI 436
++ SV R++G + V N +G+++PS+ ++ E + + NV + ++ + +ALGN+I
Sbjct: 48 LYTSVANTRLMGTLMVLNNSGIIMPSTISEIEYEFYKKHTDLNVVV--LDTKFTALGNMI 105
Query: 437 ACNDYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+ ND +V P ++ I+AD L +EV ++ IAG VG+
Sbjct: 106 SVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGA 147
>UniRef50_A3DNH5 Cluster: Putative translation initiation factor
eIF-6; n=1; Staphylothermus marinus F1|Rep: Putative
translation initiation factor eIF-6 - Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1)
Length = 227
Score = 59.7 bits (138), Expect = 5e-08
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Frame = +2
Query: 119 VRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPV--IHASVGGCRIIG 292
VR+ N +GV+ N+ LV S V +AET+ V + + + G
Sbjct: 4 VRLSLFGNPNIGVYVFANNSIALVPPSLSSGEKKV----IAETLDVELVETKIANTILNG 59
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPE-NVKLQRVEERLSALGNVIACNDYVALVHP 469
+ VGN NG+++P D EL + N+L + ++ + + +ALGN++ CN+ +
Sbjct: 60 VLVVGNDNGIILPRIILDEELDILNNNLKKHDLNIYVSRSKNTALGNILLCNNKACIAGS 119
Query: 470 DLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+L++ +++ L VE + I + GS
Sbjct: 120 ELERQELNKISEALGVEALYKDIMNLTIPGS 150
>UniRef50_Q971I4 Cluster: Translation initiation factor 6; n=4;
Sulfolobaceae|Rep: Translation initiation factor 6 -
Sulfolobus tokodaii
Length = 223
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/104 (28%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +2
Query: 254 VIHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNV 433
+I ++ +IG GN N +L+P + D E++ I++ + +V+++ ++ R +ALGN+
Sbjct: 47 IIQTTIAKSFLIGIFVAGNNNVILLPRNVDDEEVKKIKD-IARDVRVEILDIRPTALGNI 105
Query: 434 IACNDYVALVHPDLDKDTEEILADTLNVE-VFRQTIAGNVLVGS 562
I N Y AL++P+L + + ++L ++ + + +IA + VGS
Sbjct: 106 ILTNSYGALIYPELSSIEFKKIKESLQIDNIEKGSIANIITVGS 149
>UniRef50_Q97CU0 Cluster: Translation initiation factor 6; n=1;
Thermoplasma volcanium|Rep: Translation initiation
factor 6 - Thermoplasma volcanium
Length = 218
Score = 56.4 bits (130), Expect = 4e-07
Identities = 45/157 (28%), Positives = 73/157 (46%)
Frame = +2
Query: 92 VKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASV 271
V RKT +M R F +G+++K + + E + F L I I S+
Sbjct: 3 VIRKTSVM--RSSF-----IGIYAKAWDDVAFITKMADEKTVNEFREVLQVDIKRI--SI 53
Query: 272 GGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDY 451
G +IG M N NG+++P + L I NV ++++++A+GN I ND+
Sbjct: 54 DGSTLIGTMIAVNSNGIVLPYGSNIDGLDGIDG---RNVLY--LKDKINAVGNDIIANDH 108
Query: 452 VALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
A++H + + DTL VE R +I + VGS
Sbjct: 109 GAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGS 145
>UniRef50_Q9P9D7 Cluster: Translation initiatin factor 6; n=1;
uncultured marine group II euryarchaeote 37F11|Rep:
Translation initiatin factor 6 - uncultured marine group
II euryarchaeote 37F11
Length = 220
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/99 (28%), Positives = 53/99 (53%)
Frame = +2
Query: 266 SVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACN 445
S+GG +IG + GN G+ V T++++ ++L + +E ++ GN++ N
Sbjct: 51 SIGGSNLIGALLAGNTKGMAVADIATESDI----DALTAYGDVVVMEGGVNTAGNLLLVN 106
Query: 446 DYVALVHPDLDKDTEEILADTLNVEVFRQTIAGNVLVGS 562
+ + P + KD +IL++ L V++ TI G +VGS
Sbjct: 107 EQGCVASPSIPKDGLDILSEVLGVDIISTTIGGQDVVGS 145
>UniRef50_Q29281 Cluster: Orf protein; n=1; Sus scrofa|Rep: Orf
protein - Sus scrofa (Pig)
Length = 92
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 371 SLPENVKLQRVEERLSALGNVIACNDYVALVHPDL 475
+ P++V+++RVEERLSALGNV CNDY L P L
Sbjct: 49 AFPDSVQIRRVEERLSALGNVTTCNDYGGLSPPRL 83
>UniRef50_A2ZIH4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 118
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2
Query: 485 TEEILADTLNVEVFRQTIAGNVLVGS 562
TEE+++D L VEVFRQTI+GN+LVGS
Sbjct: 44 TEEVISDVLGVEVFRQTISGNILVGS 69
>UniRef50_Q3LWK6 Cluster: Elongation initiation factor 6; n=1;
Bigelowiella natans|Rep: Elongation initiation factor 6
- Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/138 (18%), Positives = 69/138 (50%)
Frame = +2
Query: 113 MAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIG 292
M V++ + G + +T+ C+ + +N + ++ + + +I IG
Sbjct: 1 MIVKIYLKGIENFGNYITITDKICIFSEDVCKNIV-LSSNKIWKKLKMIPFRSYDQNFIG 59
Query: 293 RMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIACNDYVALVHPD 472
M +GN NGL++ + +D +L+++ + +++K+ R+++ + G+ + +++ ++ +
Sbjct: 60 NMILGNTNGLIISNFFSDYKLRYLIKNSWDDIKILRLDDNRNNPGSFMTVSNFHTILGRN 119
Query: 473 LDKDTEEILADTLNVEVF 526
L K T + + L V+
Sbjct: 120 LQKKTIQKIKSYLKTSVY 137
>UniRef50_Q3K821 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas fluorescens PfO-1|Rep: Putative
uncharacterized protein - Pseudomonas fluorescens
(strain PfO-1)
Length = 263
Score = 37.1 bits (82), Expect = 0.28
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +2
Query: 263 ASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKLQRVEERLSALGNVIAC 442
A V G R++ R + +STTD +++H+R ++ +++ R+ L V+
Sbjct: 180 AEVSGLRVVARSAFSPTLPFITAASTTDEQIEHLRRAMNSSLQDLPDVARILGLPEVLPA 239
Query: 443 NDYVALVHPDLDKDTEEI 496
++ LV D ++ EE+
Sbjct: 240 SESDYLVLLDYQREAEEL 257
>UniRef50_Q18WJ5 Cluster: Hydantoinase/oxoprolinase; n=2;
Desulfitobacterium hafniense|Rep:
Hydantoinase/oxoprolinase - Desulfitobacterium hafniense
(strain DCB-2)
Length = 658
Score = 35.9 bits (79), Expect = 0.65
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 317 GLLVPSSTTDTELQHIRNS-LPENVKLQRVEERLSALGNVIACNDYVAL-VHPDLDKDTE 490
GLLV +S T T+L H+R S P NV R+ ++ A ++ +++ L +H +K +
Sbjct: 413 GLLVKASVTPTDLLHVRGSYTPGNVSAARLGIKMMAHRLGVSAEEFIDLALHQVTEKLSL 472
Query: 491 EILADTLN 514
+LA LN
Sbjct: 473 ALLASMLN 480
>UniRef50_A6PT32 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 308
Score = 35.9 bits (79), Expect = 0.65
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -1
Query: 522 TSTFNVSANISSVSLSKSGCTSAT*SLQAMTLPRALSRSSTRCNFTFSGRL 370
++ F + NI + L +SGC+SAT T + SS NFTFSG L
Sbjct: 187 STEFTFNGNIGELHLEQSGCSSAT-IRDCETARKMTVHSSGSSNFTFSGNL 236
>UniRef50_Q8MKI9 Cluster: Brca2 protein; n=8; Eukaryota|Rep: Brca2
protein - Canis familiaris (Dog)
Length = 3446
Score = 34.3 bits (75), Expect = 2.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 29 CVFRNPREESHHIVKYIIREKVKRKTKIMAVRVQFENNNE 148
C+FRN REE KY ++ K + ++ +FE N+E
Sbjct: 2858 CIFRNEREEEKEATKYAEIQQKKLEVLFNKIQAEFEKNDE 2897
>UniRef50_Q19Q26 Cluster: CG1648-like; n=1; Belgica antarctica|Rep:
CG1648-like - Belgica antarctica
Length = 231
Score = 33.9 bits (74), Expect = 2.6
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 152 GVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVI-HASVGGCRIIGRMTVGNKNGLLV 328
G+F K + +A +EN + E ++ +T I HAS +IG + G K+
Sbjct: 18 GLFEKKKKSATDLATEKAENAKKMAEDQIKKTSDAITHASSSATGLIGGIADGVKSDSKT 77
Query: 329 PSSTTDTELQHIRNSLPENV 388
+ TD +L +I +SL + +
Sbjct: 78 AAKATDEKLDNIESSLEDQI 97
>UniRef50_A7TSX1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 644
Score = 33.9 bits (74), Expect = 2.6
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = +2
Query: 137 NNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRII-GRMTVGNK 313
+N E ++TN + A+ G N Y EL +T+ G RI GR+ + N+
Sbjct: 391 SNGEKAYTCQITNLVMVCALKGYVNIYDALSGELIKTVQKTEKEPGFLRISQGRLLLSNR 450
Query: 314 NGLL-----VPSSTTDTELQHIRNSLPENVKLQRVEERLSA 421
++ +P ++T S N + +E L+A
Sbjct: 451 ENMVHYFKFIPDDNSETSKSGTGQSSSANRNTTKWKETLNA 491
>UniRef50_A0RV31 Cluster: Putative uncharacterized protein; n=1;
Cenarchaeum symbiosum|Rep: Putative uncharacterized
protein - Cenarchaeum symbiosum
Length = 1566
Score = 33.9 bits (74), Expect = 2.6
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +2
Query: 92 VKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEA-ELAETIPVIHAS 268
V R T A + +N G F+ T+T AI G+ N ++ +++T P +
Sbjct: 325 VGRATATDASGITSLTHNTPGEFTLGTSTVIWTAIDGAGNIAVATQSVTVSDTTPPVIDG 384
Query: 269 VGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPENVKL 394
+GG + T GN L P + + + N P+N L
Sbjct: 385 IGGVAVEAAGTGGNTIDLGTPGVSDAVGVLSLENDAPQNYPL 426
>UniRef50_Q9V4E6 Cluster: CG1901-PA, isoform A; n=4; Sophophora|Rep:
CG1901-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 701
Score = 33.5 bits (73), Expect = 3.5
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +2
Query: 77 IIREKVKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELA----E 244
IIR K K + V F + +++ +N Y L+ + S+NF +F +L+
Sbjct: 160 IIRAKSTPKMGLKNVFESFSKQSRDSIYNASSNKYSLINVSQSKNFPQLFNKKLSVQWIN 219
Query: 245 TIPVIHASVGGCRIIGRMTVGNKNGLLVPSSTTD-TELQHI 364
T+P+ R IG T + PS D T L+H+
Sbjct: 220 TVPIQSRQTRETRDIGLETKRHSK----PSKRVDETRLKHL 256
>UniRef50_Q24HL4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 654
Score = 33.5 bits (73), Expect = 3.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 187 KAVCVC*FTEHS--HFIIIFKLNANRHDFGFSFNLFPYYVFHNMMRFFTW 44
K + C FT++ FI + N H+F +N PYYV +N+ F+TW
Sbjct: 530 KKIMNCRFTQNDVIQFIQFCEENKVTHNFVDLYNYLPYYVANNIF-FYTW 578
>UniRef50_Q864S8 Cluster: Breast cancer type 2 susceptibility protein
homolog; n=7; Euteleostomi|Rep: Breast cancer type 2
susceptibility protein homolog - Felis silvestris catus
(Cat)
Length = 3372
Score = 33.5 bits (73), Expect = 3.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 29 CVFRNPREESHHIVKYIIREKVKRKTKIMAVRVQFENNNE 148
C+FRN REE KY ++ K + ++ +FE ++E
Sbjct: 2783 CIFRNEREEEREATKYAEAQQKKLEVLFNKIQAEFEKHDE 2822
>UniRef50_UPI0000E47861 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 196
Score = 32.7 bits (71), Expect = 6.1
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 125 VQFENNNEVGVFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMTV 304
+Q+E NN + +F+ +NT + A + +V + T VIH G + R+ +
Sbjct: 103 LQYETNNSIDIFT--SNTEKMTAKXXNVXLMTVVRPKYRITTDVIHTICKGFGNVLRIVI 160
Query: 305 GNKNGLLVPSST 340
KNG+ S+T
Sbjct: 161 FKKNGVQAMSAT 172
>UniRef50_A6WWT2 Cluster: Putative uncharacterized protein; n=1;
Ochrobactrum anthropi ATCC 49188|Rep: Putative
uncharacterized protein - Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 577
Score = 32.7 bits (71), Expect = 6.1
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 402 TRCNFTFSGRLFLMCCNSVSVVEDGTKRPFLFPTVILPMIRQPPTLACITGMV 244
T NFT+ G F+ ++++VED + P+ + M+ +P LA + M+
Sbjct: 157 TFINFTYFGAFFVAIITALALVEDSEEIPWWAGITPILMVSKPAVLAAMPAMI 209
>UniRef50_A7PKY5 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 591
Score = 32.7 bits (71), Expect = 6.1
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 155 VFSKLTNTYCLVAIGGSENFYSVFEAELAETIPVIHASVGGCRIIGRMT--VGNKNGLLV 328
V SKLT + V + + EAELAE + + S+ C+ ++T N NG L+
Sbjct: 425 VLSKLTTHFLRV-----HSRQCIDEAELAEHVVGLTCSLASCQFRKKLTRLSVNANGSLI 479
Query: 329 PSSTTDTELQHIRNSLPENVKLQRVEERLS 418
P +TD L L V + +V+ R +
Sbjct: 480 PKDSTDRNLIKKSVWLKALVAIPKVQPRFA 509
>UniRef50_Q30V10 Cluster: Pyridoxal phosphate-dependent enzyme
apparently involved in regulation of cell wall
biogenesis-like; n=1; Desulfovibrio desulfuricans
G20|Rep: Pyridoxal phosphate-dependent enzyme apparently
involved in regulation of cell wall biogenesis-like -
Desulfovibrio desulfuricans (strain G20)
Length = 1156
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 248 IPVIHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPEN 385
IPVI AS+GG + M +N + P+ +T L H R L N
Sbjct: 511 IPVIAASMGGSGALNYMPEPGRNTIWFPAGSTQDILDHARRLLSMN 556
>UniRef50_Q1MFY0 Cluster: Putative uncharacterized protein; n=1;
Rhizobium leguminosarum bv. viciae 3841|Rep: Putative
uncharacterized protein - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 177
Score = 32.3 bits (70), Expect = 8.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Frame = +2
Query: 188 VAIGGSENFYS-VFEAELAETIPVIHASVG---GCRIIGRMTVGNKNGLL-----VPSST 340
V +GG +FY + E E V+ +G G R+ GR+T+GN+ ++ P
Sbjct: 35 VDLGGGADFYRRLARIETIECFVVMGNDLGEGQGRRVAGRVTIGNQRHVISERHGSPDCR 94
Query: 341 TDTELQH 361
DTEL+H
Sbjct: 95 VDTELRH 101
>UniRef50_Q0S1G3 Cluster: Oxidoreductase; n=42; Bacteria|Rep:
Oxidoreductase - Rhodococcus sp. (strain RHA1)
Length = 879
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 80 IREKVKRKTKIMAVRVQFENNNEVGVFSKLTNTYCLVAIG 199
+REK++ + ++M VRV EN VG + T T VA+G
Sbjct: 139 MREKIRIENRLMPVRVLTENGRAVGAAALNTRTGEFVAVG 178
>UniRef50_Q00V96 Cluster: Sulfolipid synthase; n=2;
Ostreococcus|Rep: Sulfolipid synthase - Ostreococcus
tauri
Length = 573
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 203 SENFYSVFEAELAETIPVIHASVGGCRIIGRMTVGNKNGLLVPSSTTDTELQHIRNSLPE 382
SE V +A ++PV+ + GG ++ +T GLL P D +H+ L +
Sbjct: 359 SETLGFVVMESMASSVPVVAVAAGG--LLDILTKPGDVGLLYPEYDYDAAAKHVTMLLED 416
Query: 383 NVKLQRVEE 409
+V+ +R+ E
Sbjct: 417 DVERKRMGE 425
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,575,876
Number of Sequences: 1657284
Number of extensions: 11277328
Number of successful extensions: 29827
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 28780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29771
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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