Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8f13
(174 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0469 + 14439472-14440905 28 0.93
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 0.93
11_06_0273 - 21810317-21810535,21810673-21810740,21810879-21810960 27 2.1
11_04_0358 + 16725417-16725422,16725789-16725858,16727825-167286... 27 2.8
08_02_1198 + 25204896-25206755 26 4.9
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 26 4.9
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 26 4.9
04_01_0445 + 5812277-5813893 26 4.9
04_01_0443 - 5776275-5777921 26 4.9
03_06_0522 - 34494989-34495045,34495171-34495234,34495378-344954... 26 4.9
02_04_0150 - 20215070-20217577 26 4.9
11_06_0722 - 26678873-26680843 25 6.5
08_02_1416 - 26915306-26915459,26915553-26915668,26915798-269159... 25 6.5
02_04_0148 - 20198407-20201424 25 6.5
01_06_1652 + 38918159-38918377,38918502-38919428 25 6.5
12_01_0616 - 5076126-5076371,5077386-5077613,5079356-5079859 25 8.6
10_02_0079 + 5016115-5016936 25 8.6
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 25 8.6
08_01_0414 + 3684491-3684589,3684770-3684838,3685004-3685033,368... 25 8.6
04_04_1178 + 31508349-31508461,31510074-31510932 25 8.6
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 25 8.6
04_04_1013 + 30109321-30110790 25 8.6
04_04_1006 + 30048618-30050087 25 8.6
03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068 25 8.6
>05_03_0469 + 14439472-14440905
Length = 477
Score = 28.3 bits (60), Expect = 0.93
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 12 VTPKTKPARKSPGS--LPPCWKTTEYTSRSCPP 104
+T T+ AR PG+ +PP W+ T+RS PP
Sbjct: 187 LTAVTEFARGVPGAPTVPPVWEREALTTRSWPP 219
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 0.93
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 2 IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNT 136
I F D K+K K K +EN+ + F +M+ D QYL +NT
Sbjct: 354 ILFNDMKEKGVKSGK-KCVLSMENHGIGFLLMAYNDVQYLVPNNT 397
>11_06_0273 - 21810317-21810535,21810673-21810740,21810879-21810960
Length = 122
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 18 PKTKPARKSPGSLPPCWKTTEYT-SRSCPP 104
PKTK R G+ P W + T SRS PP
Sbjct: 51 PKTKQPRGVKGTRRPSWSSWSSTASRSSPP 80
>11_04_0358 +
16725417-16725422,16725789-16725858,16727825-16728693,
16729109-16729198,16730071-16730356,16730573-16730592
Length = 446
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 163 DDTVITRTFRVIELQVLFVFGGHDLEVYSVVFQHGGKLPGDFLAGFVFG 17
DDT V+ ++ V GG D+ V F GG + L GF+FG
Sbjct: 155 DDTTTEDDLMVVSAELEKVLGGVDVASARVSFAMGGGVDCP-LQGFLFG 202
>08_02_1198 + 25204896-25206755
Length = 619
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 20 KDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDD 154
+DK + K S + VL +YF+ Q + +G SDD
Sbjct: 267 QDKMTAKESLIWLGVLRREEIYFRSSDNVGSQITHRSSREGKSDD 311
>07_03_0011 + 12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 163 DDTVITRTFRVIELQVLFVFGGHDLEVYSVVFQHGGK 53
D T+ + + V + ++L+ GH VYSV F GG+
Sbjct: 978 DSTI--KLWEVEQGRLLYSLAGHRQPVYSVAFSPGGE 1012
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 15 TPKTKPARKSPGSLPPCWKTTEYTSRSCPPKT 110
TPKT +RK+P PP + + + + P+T
Sbjct: 18 TPKTSSSRKAPPPPPPLVQAAAHHAAAGQPET 49
>04_01_0445 + 5812277-5813893
Length = 538
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 30 PARKSPGSLPP 62
PA KSPGSLPP
Sbjct: 56 PASKSPGSLPP 66
>04_01_0443 - 5776275-5777921
Length = 548
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 30 PARKSPGSLPP 62
PA KSPGSLPP
Sbjct: 56 PASKSPGSLPP 66
>03_06_0522 -
34494989-34495045,34495171-34495234,34495378-34495494,
34495878-34496032,34496221-34496319,34496464-34496593,
34496727-34496866,34497050-34497239,34497346-34497547,
34497589-34497631
Length = 398
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 135 VLSSFRYCLSSVDMILKYTLLFSNTGVNFQETFLLVLSLES 13
+LS YC++S MIL ++ SN N + +L +L S
Sbjct: 109 LLSGICYCIASCSMILLNKVVLSNYNFNAGISLMLYQNLIS 149
>02_04_0150 - 20215070-20217577
Length = 835
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 145 RTFRVIELQVLFVFGGHDLEVYSVVFQHGGKLPGDFLAGFVFGV 14
R F V+E+++ F+ +E Y + PG F+A F F V
Sbjct: 381 RAFDVVEMELRFL-----VEYYQAIIPLALPKPGIFIANFAFSV 419
>11_06_0722 - 26678873-26680843
Length = 656
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 160 DTVITRTFRVIELQVLFV 107
D + RTFRVIE+++ FV
Sbjct: 246 DRCVERTFRVIEVELAFV 263
>08_02_1416 -
26915306-26915459,26915553-26915668,26915798-26915910,
26915995-26916130,26916219-26916338,26916472-26916648,
26916790-26916862,26916948-26917083,26917179-26918055,
26918138-26918331,26918438-26918620,26918730-26918796,
26918900-26919092,26919317-26919363,26919478-26919574,
26919663-26919790,26919905-26920009,26920763-26920879
Length = 1010
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 53 FTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGD 172
F +LE + + ++ E K+Y NTKG D+R+ D
Sbjct: 318 FKNLLEEDSLKLSLLMLE-KEYENAINTKGELDERMFAND 356
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 163 DDTVITRTFRVIELQVLFVFGGHDLEVYSVV 71
DD + + + +ELQ L+ G DLE+ S V
Sbjct: 447 DDAMQQKHLQEVELQHLYQMMGPDLEIVSAV 477
>01_06_1652 + 38918159-38918377,38918502-38919428
Length = 381
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 48 GSLPPCWKTTEYTSRSCPPKTNST*SSITRKVLVMTVSSTV 170
G + +K +SRSCPP S S + + LV+ SS +
Sbjct: 120 GGVAKQYKLGGTSSRSCPPDQGSL-SLVAKNTLVVAQSSRI 159
>12_01_0616 - 5076126-5076371,5077386-5077613,5079356-5079859
Length = 325
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 103 GGHDLEVYSVVFQHGGKLPGDFLA 32
GG L Y V HGG+ DF+A
Sbjct: 164 GGSQLAFYGVYDGHGGRAAVDFVA 187
>10_02_0079 + 5016115-5016936
Length = 273
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 9 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCPP 104
+ TP T PA+ +PG+ P + + PP
Sbjct: 170 AATPTTAPAKNAPGTSYPARQAGRPRQAAAPP 201
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 53 FTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYG 169
F V++N YF + ED++ +++DN G + G
Sbjct: 200 FGVVMDNEDDYFISLREEDEKGMRVDNVAGDHASGSVIG 238
>08_01_0414 +
3684491-3684589,3684770-3684838,3685004-3685033,
3685540-3685596,3685884-3685954,3686185-3686266,
3686470-3686559,3686647-3686685
Length = 178
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -1
Query: 159 IRSSLEPFVLSSFRYCLSSVDMILKYTLLFSNTGVNFQETFLLVLSLESPN 7
+ S++E L++F CL+ +D+ + +E L VLS + N
Sbjct: 61 LHSNIELLELTNFSMCLTMIDLCFEVAAALEKIDQFVEEQKLDVLSSDKTN 111
>04_04_1178 + 31508349-31508461,31510074-31510932
Length = 323
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 22 RQNQQESLLEVYPRVGKQQSILQD 93
+++QQE+L EV R K++S LQD
Sbjct: 23 QESQQETLEEVLSRHRKEKSKLQD 46
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 27 KPARKSPGSLPPCWKTTEYTSRSCPPKTNST*SSIT 134
+P+R +L ++ Y+S SCPP+ S+ S T
Sbjct: 439 RPSRPPRRALNRINSSSTYSSSSCPPEPTSSTSGST 474
>04_04_1013 + 30109321-30110790
Length = 489
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 100 GHDLEVYSVVFQHGGKL 50
G+ + + SVV+QHGG+L
Sbjct: 327 GYAVRLKSVVYQHGGRL 343
>04_04_1006 + 30048618-30050087
Length = 489
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3
Query: 100 GHDLEVYSVVFQHGGKL 50
G+ + + SVV+QHGG+L
Sbjct: 327 GYAVRLKSVVYQHGGRL 343
>03_02_0360 - 7796799-7796816,7797477-7797587,7797760-7798068
Length = 145
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +3
Query: 15 TPKTKPARKSPGSLPPCWKTTEYT--SRSC 98
T K P +SP P CW E T +RSC
Sbjct: 3 TAKQAPENESPPPPPHCWIYPECTLVTRSC 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,041,818
Number of Sequences: 37544
Number of extensions: 81714
Number of successful extensions: 324
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 37
effective length of database: 13,404,220
effective search space used: 268084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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