Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8f13
         (174 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14108-1|AAB17720.1|  350|Homo sapiens Mel-1a melatonin receptor...    27   8.2  
BC126299-1|AAI26300.1|  350|Homo sapiens melatonin receptor 1A p...    27   8.2  
BC126297-1|AAI26298.1|  350|Homo sapiens melatonin receptor 1A p...    27   8.2  
BC113816-1|AAI13817.1|  234|Homo sapiens MTNR1A protein protein.       27   8.2  
BC074947-1|AAH74947.1|  350|Homo sapiens melatonin receptor 1A p...    27   8.2  
BC074946-1|AAH74946.1|  350|Homo sapiens melatonin receptor 1A p...    27   8.2  
AB029933-1|BAA85303.1|  350|Homo sapiens melatonin 1a receptor p...    27   8.2  

>U14108-1|AAB17720.1|  350|Homo sapiens Mel-1a melatonin receptor
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 318 VFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC126299-1|AAI26300.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 318 VFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC126297-1|AAI26298.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 318 VFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC113816-1|AAI13817.1|  234|Homo sapiens MTNR1A protein protein.
          Length = 234

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 202 VFFVDSSNDVADRVKWKPSPLMTNNNV 228


>BC074947-1|AAH74947.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 318 VFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC074946-1|AAH74946.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 318 VFFVDSSNDVADRVKWKPSPLMTNNNV 344


>AB029933-1|BAA85303.1|  350|Homo sapiens melatonin 1a receptor
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 2   IAFGDSKDKTSKKVSWKFTPVLENNRV 82
           + F DS +  + +V WK +P++ NN V
Sbjct: 318 VFFVDSSNDVADRVKWKPSPLMTNNNV 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,309,257
Number of Sequences: 237096
Number of extensions: 455248
Number of successful extensions: 1497
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 76,859,062
effective HSP length: 37
effective length of database: 68,086,510
effective search space used: 1361730200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)