Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8f07
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 298  TTGRRLIDEICQIAAYTPKQTYSQ-YIMPYGDLNP 399
            TT  +LID+ C    Y P ++ S  Y+   G L P
Sbjct: 1197 TTVSQLIDDKCDSGQYYPHESCSSFYVCVNGHLVP 1231



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 469  SHKILKTKSEISALTDFLDWL 531
            S  ++    ++ AL+ +LDW+
Sbjct: 2488 SKAVMDAGYDVPALSQYLDWI 2508


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 496 EISALTDFLDWLEKEKGD 549
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 496 EISALTDFLDWLEKEKGD 549
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 496 EISALTDFLDWLEKEKGD 549
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 496 EISALTDFLDWLEKEKGD 549
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 271 TFLVGDRLASQPVREALQYSLPF 203
           T LV  RL ++PV +A     PF
Sbjct: 510 TSLVRGRLVAKPVADARDAPAPF 532


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTD 516
           +TV  Y    ++V H I  +  EI  L D
Sbjct: 260 ITVAVYGFTSEIVDHGIRFSFKEIGLLVD 288


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 268 KYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPY 384
           K++L G  +D TG  + +    +  Y P  T S Y++ +
Sbjct: 88  KFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNF 126


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTD 516
           +TV  Y    ++V H I  +  EI  L D
Sbjct: 260 ITVAVYGFTSEIVDHGIRFSFKEIGLLVD 288


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTD 516
           +TV  Y    ++V H I  +  EI  L D
Sbjct: 260 ITVAVYGFTSEIVDHGIRFSFKEIGLLVD 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,189
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)