Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8f07
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   5.4  
AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450 pr...    23   7.1  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   9.4  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 74  LKHSSCIIPVYAAHILFTNICSSTSLQI 157
           L  +S ++P+ A ++LFT I ++ S+ +
Sbjct: 285 LPPTSLVLPLIAKYLLFTFIMNTVSILV 312


>AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450
           protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/18 (61%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = +2

Query: 65  KITLKH-SSCIIPVYAAH 115
           +ITL+  +S IIPVYA H
Sbjct: 100 RITLRRGTSVIIPVYAIH 117


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 312 SPSCCIHVPANKRVLSWWETDWLLSQCG 229
           SP C + + AN RVLSW E  +  ++ G
Sbjct: 160 SPVCRM-MRANVRVLSWKEPPFTWNEIG 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,888
Number of Sequences: 2352
Number of extensions: 12524
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)