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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8f07
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64347-1|AAA58470.1|  731|Homo sapiens fgflr protein.                  35   0.18 
M58051-1|AAA52450.1|  806|Homo sapiens fibroblast growth factor ...    35   0.18 
BC128610-1|AAI28611.1|  480|Homo sapiens FGFR3 protein protein.        35   0.18 
BC121175-1|AAI21176.1|  480|Homo sapiens FGFR3 protein protein.        35   0.18 
AY768549-1|AAU89726.1|  806|Homo sapiens fibroblast growth facto...    35   0.18 
AF487554-2|AAM22078.1|  769|Homo sapiens fibroblast growth facto...    35   0.18 
AF487554-1|AAM22079.1|  771|Homo sapiens fibroblast growth facto...    35   0.18 
AF245114-1|AAF63380.1|  694|Homo sapiens fibroblast growth facto...    35   0.18 
AF238374-1|AAF97749.1|  174|Homo sapiens mutant fibroblast growt...    33   0.72 
Z71929-1|CAA96492.1|  821|Homo sapiens FGFR2 protein.                  30   5.1  
X52832-1|CAA37014.1|  821|Homo sapiens protein ( Human bek mRNA ...    30   5.1  
S41870-1|AAB19321.2|   62|Homo sapiens BEK fibroblast growth fac...    30   5.1  
M97193-1|AAA52449.1|  822|Homo sapiens fibroblast growth factor ...    30   5.1  
M87771-1|AAA59471.1|  705|Homo sapiens fibroblast growth factor ...    30   5.1  
M87770-1|AAA59470.1|  821|Homo sapiens fibroblast growth factor ...    30   5.1  
M80634-1|AAA36147.1|  822|Homo sapiens keratinocyte growth facto...    30   5.1  
M55614-1|AAA61188.1|  822|Homo sapiens TK14 protein protein.           30   5.1  
BC039243-1|AAH39243.2|  704|Homo sapiens FGFR2 protein protein.        30   5.1  
AF487553-1|AAM74056.1|  822|Homo sapiens fibroblast growth facto...    30   5.1  
AF360695-2|AAK94205.1|  819|Homo sapiens keratinocyte growth fac...    30   5.1  
AF360695-1|AAK94206.1|  820|Homo sapiens keratinocyte growth fac...    30   5.1  
AB084153-1|BAC45037.1|  709|Homo sapiens isoform of FGFR2 protein.     30   5.1  
AF097354-2|AAD31564.1|   51|Homo sapiens fibroblast growth facto...    30   6.7  
AF097354-1|AAD31565.1|   51|Homo sapiens fibroblast growth facto...    30   6.7  
BC125169-1|AAI25170.1|  594|Homo sapiens C17orf38 protein protein.     29   8.9  
AY753192-1|AAV30085.1|  754|Homo sapiens p87 phosphoinositide 3-...    29   8.9  

>M64347-1|AAA58470.1|  731|Homo sapiens fgflr protein.
          Length = 731

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 686 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 720


>M58051-1|AAA52450.1|  806|Homo sapiens fibroblast growth factor
           receptor protein.
          Length = 806

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 761 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 795


>BC128610-1|AAI28611.1|  480|Homo sapiens FGFR3 protein protein.
          Length = 480

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 435 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 469


>BC121175-1|AAI21176.1|  480|Homo sapiens FGFR3 protein protein.
          Length = 480

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 435 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 469


>AY768549-1|AAU89726.1|  806|Homo sapiens fibroblast growth factor
           receptor 3 (achondroplasia, thanatophoric dwarfism)
           protein.
          Length = 806

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 761 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 795


>AF487554-2|AAM22078.1|  769|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 769

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 724 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 758


>AF487554-1|AAM22079.1|  771|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 771

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 726 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 760


>AF245114-1|AAF63380.1|  694|Homo sapiens fibroblast growth factor
           receptor 3 protein.
          Length = 694

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLP 195
           + +S P  +Y PGG+ T  S+S+G  SVFA   LP
Sbjct: 649 LDLSAPFEQYSPGGQDTPSSSSSGDDSVFAHDLLP 683


>AF238374-1|AAF97749.1|  174|Homo sapiens mutant fibroblast growth
           factor receptor 3 protein.
          Length = 174

 Score = 33.1 bits (72), Expect = 0.72
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFA 210
           + +S P  +Y PGG+ T  S+S+G  SVFA
Sbjct: 3   LDLSAPFEQYSPGGQDTPSSSSSGDDSVFA 32


>Z71929-1|CAA96492.1|  821|Homo sapiens FGFR2 protein.
          Length = 821

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 770 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 805


>X52832-1|CAA37014.1|  821|Homo sapiens protein ( Human bek mRNA for
           fibroblast growth factor receptor-BEK. ).
          Length = 821

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 770 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 805


>S41870-1|AAB19321.2|   62|Homo sapiens BEK fibroblast growth factor
           receptor protein.
          Length = 62

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 11  LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 46


>M97193-1|AAA52449.1|  822|Homo sapiens fibroblast growth factor
           receptor 2 protein.
          Length = 822

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 771 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 806


>M87771-1|AAA59471.1|  705|Homo sapiens fibroblast growth factor
           receptor protein.
          Length = 705

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 654 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 689


>M87770-1|AAA59470.1|  821|Homo sapiens fibroblast growth factor
           receptor protein.
          Length = 821

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 770 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 805


>M80634-1|AAA36147.1|  822|Homo sapiens keratinocyte growth factor
           receptor protein.
          Length = 822

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 771 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 806


>M55614-1|AAA61188.1|  822|Homo sapiens TK14 protein protein.
          Length = 822

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 771 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 806


>BC039243-1|AAH39243.2|  704|Homo sapiens FGFR2 protein protein.
          Length = 704

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 653 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 688


>AF487553-1|AAM74056.1|  822|Homo sapiens fibroblast growth factor
           receptor 2 protein.
          Length = 822

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 771 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 806


>AF360695-2|AAK94205.1|  819|Homo sapiens keratinocyte growth factor
           receptor 2 isoform BEK protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 768 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 803


>AF360695-1|AAK94206.1|  820|Homo sapiens keratinocyte growth factor
           receptor 2 isoform KGFR protein.
          Length = 820

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 769 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 804


>AB084153-1|BAC45037.1|  709|Homo sapiens isoform of FGFR2 protein.
          Length = 709

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 299 VSMSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           + +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 658 LDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 693


>AF097354-2|AAD31564.1|   51|Homo sapiens fibroblast growth factor
           receptor 2 isoform IgIIIc isoform protein.
          Length = 51

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 293 MSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 2   LSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 35


>AF097354-1|AAD31565.1|   51|Homo sapiens fibroblast growth factor
           receptor 2 isoform IgIIIb isoform protein.
          Length = 51

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 293 MSQPIREYFPGGRPTGFSASAGGTSVFASISLPF 192
           +SQP+ +Y P    T  S S+G  SVF+   +P+
Sbjct: 2   LSQPLEQYSPSYPDTRSSCSSGDDSVFSPDPMPY 35


>BC125169-1|AAI25170.1|  594|Homo sapiens C17orf38 protein protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 385 GDLNPGARRRHNVRVVTVGRYRMLKDMVS--HKILKTKSEISALT 513
           G++ PG  R H  RV+ +G  RML  +    H++ K +++   LT
Sbjct: 285 GEMLPGVSRLHTARVLVLGDDRMLGRLAQAYHRLRKRETQKFCLT 329


>AY753192-1|AAV30085.1|  754|Homo sapiens p87 phosphoinositide
           3-kinase gamma adapter protein protein.
          Length = 754

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 385 GDLNPGARRRHNVRVVTVGRYRMLKDMVS--HKILKTKSEISALT 513
           G++ PG  R H  RV+ +G  RML  +    H++ K +++   LT
Sbjct: 404 GEMLPGVSRLHTARVLVLGDDRMLGRLAQAYHRLRKRETQKFCLT 448


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,910,814
Number of Sequences: 237096
Number of extensions: 1731674
Number of successful extensions: 7646
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7646
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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