Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8f07
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S72757-1|AAB20673.1|  532|Drosophila melanogaster exu protein.        143   2e-34
AY051739-1|AAK93163.1|  532|Drosophila melanogaster LD26657p pro...   143   2e-34
AE013599-3063|AAF57430.1|  532|Drosophila melanogaster CG8994-PC...   143   2e-34
AE013599-3062|AAM68399.1|  532|Drosophila melanogaster CG8994-PB...   143   2e-34
AE013599-3061|AAF57429.1|  532|Drosophila melanogaster CG8994-PA...   143   2e-34
AY052135-1|AAK93559.1|  317|Drosophila melanogaster SD09259p pro...    31   1.1  
AE014297-4401|AAF56907.1|  317|Drosophila melanogaster CG1907-PA...    31   1.1  

>S72757-1|AAB20673.1|  532|Drosophila melanogaster exu protein.
          Length = 532

 Score =  143 bits (346), Expect = 2e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
 Frame = +1

Query: 250 VGLPPGKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 429
           V LP G Y L+G D+DTTGRRL+DEI Q+AAYTP   + QYIMPY +LNP AR+RH VRV
Sbjct: 26  VELPAGNYILVGVDIDTTGRRLMDEIVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRV 85

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTDFLDWLEKEK---GDGS--VILIYH 573
           +++G YRMLK M ++KI+K+KSEI+AL DFL+WLE+ K   G  S  ++LIYH
Sbjct: 86  ISIGFYRMLKSMQTYKIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYH 138


>AY051739-1|AAK93163.1|  532|Drosophila melanogaster LD26657p
           protein.
          Length = 532

 Score =  143 bits (346), Expect = 2e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
 Frame = +1

Query: 250 VGLPPGKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 429
           V LP G Y L+G D+DTTGRRL+DEI Q+AAYTP   + QYIMPY +LNP AR+RH VRV
Sbjct: 26  VELPAGNYILVGVDIDTTGRRLMDEIVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRV 85

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTDFLDWLEKEK---GDGS--VILIYH 573
           +++G YRMLK M ++KI+K+KSEI+AL DFL+WLE+ K   G  S  ++LIYH
Sbjct: 86  ISIGFYRMLKSMQTYKIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYH 138


>AE013599-3063|AAF57430.1|  532|Drosophila melanogaster CG8994-PC,
           isoform C protein.
          Length = 532

 Score =  143 bits (346), Expect = 2e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
 Frame = +1

Query: 250 VGLPPGKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 429
           V LP G Y L+G D+DTTGRRL+DEI Q+AAYTP   + QYIMPY +LNP AR+RH VRV
Sbjct: 26  VELPAGNYILVGVDIDTTGRRLMDEIVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRV 85

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTDFLDWLEKEK---GDGS--VILIYH 573
           +++G YRMLK M ++KI+K+KSEI+AL DFL+WLE+ K   G  S  ++LIYH
Sbjct: 86  ISIGFYRMLKSMQTYKIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYH 138


>AE013599-3062|AAM68399.1|  532|Drosophila melanogaster CG8994-PB,
           isoform B protein.
          Length = 532

 Score =  143 bits (346), Expect = 2e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
 Frame = +1

Query: 250 VGLPPGKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 429
           V LP G Y L+G D+DTTGRRL+DEI Q+AAYTP   + QYIMPY +LNP AR+RH VRV
Sbjct: 26  VELPAGNYILVGVDIDTTGRRLMDEIVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRV 85

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTDFLDWLEKEK---GDGS--VILIYH 573
           +++G YRMLK M ++KI+K+KSEI+AL DFL+WLE+ K   G  S  ++LIYH
Sbjct: 86  ISIGFYRMLKSMQTYKIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYH 138


>AE013599-3061|AAF57429.1|  532|Drosophila melanogaster CG8994-PA,
           isoform A protein.
          Length = 532

 Score =  143 bits (346), Expect = 2e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
 Frame = +1

Query: 250 VGLPPGKYSLIGWDMDTTGRRLIDEICQIAAYTPKQTYSQYIMPYGDLNPGARRRHNVRV 429
           V LP G Y L+G D+DTTGRRL+DEI Q+AAYTP   + QYIMPY +LNP AR+RH VRV
Sbjct: 26  VELPAGNYILVGVDIDTTGRRLMDEIVQLAAYTPTDHFEQYIMPYMNLNPAARQRHQVRV 85

Query: 430 VTVGRYRMLKDMVSHKILKTKSEISALTDFLDWLEKEK---GDGS--VILIYH 573
           +++G YRMLK M ++KI+K+KSEI+AL DFL+WLE+ K   G  S  ++LIYH
Sbjct: 86  ISIGFYRMLKSMQTYKIIKSKSEIAALKDFLNWLEQLKTKAGPSSDGIVLIYH 138


>AY052135-1|AAK93559.1|  317|Drosophila melanogaster SD09259p
           protein.
          Length = 317

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = +1

Query: 136 FINEFAN*ALMAMVTEVKVNGSEMEANTEVPPALAEKPVGLPPGKYSLIGWDMDTTGRRL 315
           FI   A  AL+ M ++ ++  +E    T V  ALA   +    G  +L    + T GR +
Sbjct: 131 FIGTPAEVALVRMTSDGRLPVAERRNYTNVANALAR--ITREEGLTALWRGSLPTVGRAM 188

Query: 316 IDEICQIAAYTPKQTYSQY 372
           +  + Q+A+Y+  +TY ++
Sbjct: 189 VVNMTQLASYSQFKTYFRH 207


>AE014297-4401|AAF56907.1|  317|Drosophila melanogaster CG1907-PA
           protein.
          Length = 317

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = +1

Query: 136 FINEFAN*ALMAMVTEVKVNGSEMEANTEVPPALAEKPVGLPPGKYSLIGWDMDTTGRRL 315
           FI   A  AL+ M ++ ++  +E    T V  ALA   +    G  +L    + T GR +
Sbjct: 131 FIGTPAEVALVRMTSDGRLPVAERRNYTNVANALAR--ITREEGLTALWRGSLPTVGRAM 188

Query: 316 IDEICQIAAYTPKQTYSQY 372
           +  + Q+A+Y+  +TY ++
Sbjct: 189 VVNMTQLASYSQFKTYFRH 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,479,114
Number of Sequences: 53049
Number of extensions: 518996
Number of successful extensions: 1282
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)