Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8e24
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   5.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 110 VDHGHRLLFNFGGHFVI 60
           + HGHR++++  GH+ +
Sbjct: 449 LSHGHRVIYSTVGHWYL 465


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 500 LRLVIKCHYLA*IMNEASKVEPVLIRV 420
           +RL+  C   A + +E+SKV P+L  V
Sbjct: 206 MRLISVCLCGASVHSESSKVLPLLFSV 232


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -2

Query: 494 LVIKCHYLA*IMNEASKVEPVLIRVILSDPFSGLES 387
           +++ CH L+ +M    + + V   VIL   F  + +
Sbjct: 171 VILACHMLSFLMVHQGETQFVAANVILKTRFKTINN 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,037
Number of Sequences: 336
Number of extensions: 2580
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)