Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8e22
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39853-3|AAT92078.1| 151|Caenorhabditis elegans S. cerevisiae f... 71 4e-13
U39853-4|AAK39224.1| 138|Caenorhabditis elegans S. cerevisiae f... 69 3e-12
U39999-11|AAA81109.1| 143|Caenorhabditis elegans S. cerevisiae ... 64 4e-11
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 36 0.017
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 27 6.0
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 27 8.0
U41025-3|AAA82348.1| 244|Caenorhabditis elegans Hypothetical pr... 27 8.0
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 27 8.0
>U39853-3|AAT92078.1| 151|Caenorhabditis elegans S. cerevisiae
fis1-related protein2, isoform b protein.
Length = 151
Score = 71.3 bits (167), Expect = 4e-13
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +3
Query: 69 VLDEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN 248
+L+E + L + Q +G+ S + F +A ++ SK D+++GI+ L++L
Sbjct: 6 ILEERTNPAVLMNAREQYMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLR 65
Query: 249 SHPE--GKRDYLFYLAIGNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRM 410
+ KR+Y++YLA+ +ARIK+Y+ AL Y+ L+ E NQQ L+ I M
Sbjct: 66 DDEDRTSKRNYVYYLAVAHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESIKSAM 121
>U39853-4|AAK39224.1| 138|Caenorhabditis elegans S. cerevisiae
fis1-related protein2, isoform a protein.
Length = 138
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +3
Query: 120 FHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHPE--GKRDYLFYLAI 293
+ Q +G+ S + F +A ++ SK D+++GI+ L++L + KR+Y++YLA+
Sbjct: 10 YMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLRDDEDRTSKRNYVYYLAV 69
Query: 294 GNARIKEYNKALHYVKSFLEIEPANQQVLALERQINKRM 410
+ARIK+Y+ AL Y+ L+ E NQQ L+ I M
Sbjct: 70 AHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESIKSAM 108
>U39999-11|AAA81109.1| 143|Caenorhabditis elegans S. cerevisiae
fis1-related protein1 protein.
Length = 143
Score = 64.5 bits (150), Expect = 4e-11
Identities = 32/94 (34%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = +3
Query: 144 NVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN--SHPEGKRDYLFYLAIGNARIKEY 317
+VS + Q A LV S+ +I++GI +L+++ + +H E R + YLA+ +AR+K Y
Sbjct: 23 SVSRENQISLAIVLVGSEDRREIKEGIEILEDVVSDTAHSEDSRVCVHYLALAHARLKNY 82
Query: 318 NKALHYVKSFLEIEPANQQVLALERQINKRMEKE 419
+K+++ + + L EP+N Q L R + K+M++E
Sbjct: 83 DKSINLLNALLRTEPSNMQATELRRAVEKKMKRE 116
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 90 SEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHPEGKR 269
++ + R F H + Q W LV S+YP + RK I K + N H
Sbjct: 65 TDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVT 124
Query: 270 DYLFYLAIGNARIKEYNKAL 329
+F +++ + ++ YN L
Sbjct: 125 GRVFLVSLAHTLLENYNSNL 144
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 75 DEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGI 224
D+++ E L KFE+ F Q H N S + W L+R +P ++ K I
Sbjct: 427 DDLLYLEFLTKFEKNFITQGHYENRSVFESLDIGWQLLRI-FPREMLKRI 475
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 81 IVSSEDLQKFERVFHEQLHQGNVSHKAQF-EYA--WCLVRSKYPTDIRKGILLLKELFNS 251
I++ + + FE VFH++ NV K F E+A ++ S DI+ ++ LF++
Sbjct: 239 ILAYDRVLSFEEVFHQR--GINVVKKIMFDEFADSKAMIASGLLNDIKNSARIVVCLFSN 296
Query: 252 HPEGKRDYLFYLAIGNARIKEY 317
E R++L + EY
Sbjct: 297 TRESSREFLTAANTQGMNVNEY 318
>U41025-3|AAA82348.1| 244|Caenorhabditis elegans Hypothetical
protein C01C4.2 protein.
Length = 244
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 66 DVLDEIVSSEDLQKFERVFHEQLHQGNVSHK 158
+VL SE LQK E++F++Q+ V HK
Sbjct: 147 NVLSYTPRSEALQKAEKIFNDQMPSLPVEHK 177
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 81 IVSSEDLQKFERVFHEQLHQGNVSHKAQF-EYA--WCLVRSKYPTDIRKGILLLKELFNS 251
I++ + + FE VFH++ NV K F E+A ++ S DI+ ++ LF++
Sbjct: 213 ILAYDRVLSFEEVFHQR--GINVVKKIMFDEFADSKAMIASGLLNDIKNSARIVVCLFSN 270
Query: 252 HPEGKRDYLFYLAIGNARIKEY 317
E R++L + EY
Sbjct: 271 TRESSREFLTAANTQGMNVNEY 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,135,829
Number of Sequences: 27780
Number of extensions: 228348
Number of successful extensions: 564
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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