Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8e21
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 178 2e-44
U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein. 178 2e-44
BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, sub... 178 2e-44
BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, sub... 178 2e-44
AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, sub... 178 2e-44
AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, sub... 178 2e-44
BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein. 36 0.12
BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein. 36 0.12
AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens ... 36 0.12
AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein. 36 0.12
AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein. 36 0.12
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 34 0.48
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 31 2.5
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 31 2.5
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 31 2.5
Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory elem... 30 7.8
Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory elem... 30 7.8
Z97054-1|CAI42644.1| 1196|Homo sapiens upstream regulatory eleme... 30 7.8
Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory eleme... 30 7.8
DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase ... 30 7.8
BC063505-1|AAH63505.1| 388|Homo sapiens HUWE1 protein protein. 30 7.8
AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein. 30 7.8
AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1 p... 30 7.8
AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory ele... 30 7.8
AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory ele... 30 7.8
AL592046-1|CAI39578.1| 1196|Homo sapiens upstream regulatory ele... 30 7.8
AK223167-1|BAD96887.1| 439|Homo sapiens E3 ubiquitin protein li... 30 7.8
AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LAS... 30 7.8
AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein. 30 7.8
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 178 bits (433), Expect = 2e-44
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 280 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 459
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 460 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 618
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEEL 113
>U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein.
Length = 501
Score = 178 bits (433), Expect = 2e-44
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 280 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 459
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 460 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 618
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEEL 113
>BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 178 bits (433), Expect = 2e-44
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 280 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 459
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 460 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 618
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEEL 113
>BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 178 bits (433), Expect = 2e-44
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 280 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 459
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 460 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 618
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEEL 113
>AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 178 bits (433), Expect = 2e-44
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 280 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 459
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 460 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 618
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEEL 113
>AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a,
subunit 3 variant protein.
Length = 501
Score = 178 bits (433), Expect = 2e-44
Identities = 81/113 (71%), Positives = 97/113 (85%)
Frame = +1
Query: 280 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 459
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 460 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEEL 618
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEEL 113
>BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 277 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 456
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 457 LYEDKDGLRKEEISAL 504
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein.
Length = 285
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 277 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 456
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 138 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 197
Query: 457 LYEDKDGLRKEEISAL 504
L ++++ ++E I L
Sbjct: 198 LQKERED-KEETIDIL 212
>AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ12850 fis, clone NT2RP2003394, weakly similar to
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
Length = 472
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 277 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 456
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 325 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 384
Query: 457 LYEDKDGLRKEEISAL 504
L ++++ ++E I L
Sbjct: 385 LQKERED-KEETIDIL 399
>AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 277 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 456
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 457 LYEDKDGLRKEEISAL 504
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein.
Length = 884
Score = 35.9 bits (79), Expect = 0.12
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +1
Query: 277 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 456
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 737 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 796
Query: 457 LYEDKDGLRKEEISAL 504
L ++++ ++E I L
Sbjct: 797 LQKERED-KEETIDIL 811
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 33.9 bits (74), Expect = 0.48
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +1
Query: 295 EQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI---EASIRLKE--- 456
E+Q +ER+R +E+LH++ G R+ + + RL+ +R E +RL+E
Sbjct: 1307 EEQPLLRQERDRKFRE--EELLHQEQG-RKFLEEEQRLREERERKFLKEEQQLRLEEREQ 1363
Query: 457 LYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRK 570
L +D+D +EE LS ++F +Q++ R+
Sbjct: 1364 LRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERE 1401
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 274 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 453
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 454 ELYEDKDGLRKEEISALSG 510
L D +EEI L G
Sbjct: 1109 ALKRQVDE-AEEEIERLDG 1126
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 274 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 453
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 454 ELYEDKDGLRKEEISALSG 510
L D +EEI L G
Sbjct: 1109 ALKRQVDE-AEEEIERLDG 1126
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 31.5 bits (68), Expect = 2.5
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +1
Query: 274 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 453
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1055 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1113
Query: 454 ELYEDKDGLRKEEISALSG 510
L D +EEI L G
Sbjct: 1114 ALKRQVDE-AEEEIERLDG 1131
>Z97054-12|CAI42656.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 3036 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 3084
>Z97054-10|CAI42654.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>Z97054-1|CAI42644.1| 1196|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 1196
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 825 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 873
>Z94044-4|CAI42354.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>DQ097177-1|AAY98258.1| 4374|Homo sapiens Mcl-1 ubiquitin ligase
protein.
Length = 4374
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>BC063505-1|AAH63505.1| 388|Homo sapiens HUWE1 protein protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 17 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 65
>AY929612-1|AAX24125.1| 4374|Homo sapiens LASU1 protein.
Length = 4374
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>AY772009-1|AAV90838.1| 4374|Homo sapiens ARF-binding protein 1
protein.
Length = 4374
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>AL592046-4|CAI39581.1| 3407|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 3407
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 3036 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 3084
>AL592046-3|CAI39580.1| 4374|Homo sapiens upstream regulatory element
binding protein 1 (UREB1) protein.
Length = 4374
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 4003 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 4051
>AL592046-1|CAI39578.1| 1196|Homo sapiens upstream regulatory
element binding protein 1 (UREB1) protein.
Length = 1196
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 825 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 873
>AK223167-1|BAD96887.1| 439|Homo sapiens E3 ubiquitin protein
ligase URE-B1 variant protein.
Length = 439
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 68 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 116
>AB071605-1|BAC06833.1| 3360|Homo sapiens HECT domain protein LASU1
protein.
Length = 3360
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 2989 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 3037
>AB002310-1|BAA20771.2| 3192|Homo sapiens KIAA0312 protein.
Length = 3192
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 451 KELYEDKDGLRKEEISA-LSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 612
+EL +GLRKE+++ + H F++ Y +E HRK P E+ + + FE
Sbjct: 2821 QELERLDEGLRKEDMAVHVRRDHVFEDSY------RELHRKSPEEMKNRLYIVFE 2869
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,589,028
Number of Sequences: 237096
Number of extensions: 1295193
Number of successful extensions: 3238
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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