Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8e18
         (559 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   9.0  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 165  ASQNLSLDKACRVNKNYGEEICDALLNREG-TKYLKEELDIQELIAGIETWKNVLLTAMP 341
            + +N S    C    +Y +E     ++  G +K L E +D  E I      ++VLL+ + 
Sbjct: 2485 SQRNCSRGPPCSPGLDYDDESHAKYVSDIGRSKMLNESVDDSETIREYRRPRDVLLSVVG 2544

Query: 342  SFLI 353
             F+I
Sbjct: 2545 EFII 2548


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 6/28 (21%)
 Frame = +3

Query: 414 IIGELLACISNL------VNTYFFYELP 479
           IIG LL   +NL       NT+FFY LP
Sbjct: 285 IIGVLLRYATNLHVSPLTPNTFFFYMLP 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,638
Number of Sequences: 2352
Number of extensions: 8969
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)