Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8d21
(422 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 23 1.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 2.1
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 2.1
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 21 3.7
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 3.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 3.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 3.7
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 4.9
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 20 8.6
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 20 8.6
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 22.6 bits (46), Expect = 1.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 273 HLRSGRGCPDCWCPPGASQLPPLQRV 350
HLR GRG + P ++ +P + V
Sbjct: 192 HLRKGRGAIGAYGPEKSASIPKKKEV 217
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 22.2 bits (45), Expect = 2.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 64 GVFTGPKNCDDY 29
G+F+ PKNC Y
Sbjct: 564 GIFSDPKNCAAY 575
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 2.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 403 NRQPDQRILQPNQHPSG*TLCKGGSWLAP 317
N PD ++P S TLC G ++P
Sbjct: 285 NGSPDVIKVEPELSDSEKTLCNGSKGISP 313
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.4 bits (43), Expect = 3.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 419 TMPMAKPAARPENPTAKPAPKWMNP 345
T P+ P P NP P P + +P
Sbjct: 15 TSPLLTP---PHNPAYSPPPSYCDP 36
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 3.7
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 76 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 255
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 115 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 173
Query: 256 MAGIIAIYGL 285
++G+IA+ G+
Sbjct: 174 LSGLIAMCGM 183
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 3.7
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 76 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 255
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 348 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 406
Query: 256 MAGIIAIYGL 285
++G+IA+ G+
Sbjct: 407 LSGLIAMCGM 416
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 3.7
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +1
Query: 76 NKMAENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 255
+ + NPI+ + I SA Y K + SV I S+ PV+
Sbjct: 348 SSVGSRNPIHTSSYMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAFPINLSV-PVL 406
Query: 256 MAGIIAIYGL 285
++G+IA+ G+
Sbjct: 407 LSGLIAMCGM 416
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 247 PVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 342
P+V I+ G V ++AG L P P +
Sbjct: 80 PIVKYIILIDLGEVAVTVLAGILTTPFKLPYF 111
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 20.2 bits (40), Expect = 8.6
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = +3
Query: 297 PDCWCPPGASQLP 335
PDC+C +++P
Sbjct: 163 PDCFCSADGTRIP 175
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.2 bits (40), Expect = 8.6
Identities = 5/13 (38%), Positives = 9/13 (69%)
Frame = +3
Query: 297 PDCWCPPGASQLP 335
PDC+C +++P
Sbjct: 170 PDCFCSADGTRIP 182
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,220
Number of Sequences: 336
Number of extensions: 2706
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9384961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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