Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8d18
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   1.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   2.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   7.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   7.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   9.8  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +3

Query: 99  DKPTTKPICEQAFGNSGPCFAYIKLYSYNQKTKKC 203
           +KP   P+C++ F  S     +++ +S  ++  +C
Sbjct: 47  EKPFRCPVCDRRFSQSSSVTTHMRTHS-GERPYRC 80


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +3

Query: 99  DKPTTKPICEQAFGNSGPCFAYIKLYSYNQKTKKC 203
           +KP   P+C++ F  S     +++ +S  ++  +C
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTHS-GERPYRC 336


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 127 SRLLAIRALVSPTLSYTR-TIRRRRSVKNSFT-EAARGT 237
           +RLL +    SP+  +TR  I+RR   +++ T    RGT
Sbjct: 254 NRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGT 292


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -3

Query: 128 LAYRL-RCWLIT 96
           L YRL RCWLI+
Sbjct: 217 LLYRLLRCWLIS 228


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
 Frame = -3

Query: 128 LAYRL-RCWLIT 96
           L YRL RCWLI+
Sbjct: 217 LLYRLLRCWLIS 228


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 54  TTGFLFAACLTSVMSDKPTTKP 119
           TT       LT+  + KP+TKP
Sbjct: 164 TTSTTTRTTLTTKFTTKPSTKP 185



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 54  TTGFLFAACLTSVMSDKPTTKPI 122
           TT        T+  S KPT KP+
Sbjct: 168 TTRTTLTTKFTTKPSTKPTNKPV 190


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 260 RMRTEMHKVTDTFELTH 310
           + RTE+  +T TF+ T+
Sbjct: 461 KRRTELEDLTPTFDFTN 477


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 285 TLCISVRIRPMCRNDCRSP 229
           T C  V +  +C  DC +P
Sbjct: 532 TRCWEVFMDGICNEDCNNP 550


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 99  DKPTTKPICEQAFG 140
           D+P T  +C ++FG
Sbjct: 132 DRPFTCEVCNRSFG 145


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 383 FFPYIYLIVFIPSF 342
           FFP  Y +VF  SF
Sbjct: 359 FFPIDYTLVFSVSF 372


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,067
Number of Sequences: 336
Number of extensions: 1670
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)