Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8d16
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.0  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 487 ELFKEYFASEDVNAPGNLSSGRPASE 564
           E+F +   +ED N P  L  GR   E
Sbjct: 536 EVFMDGICNEDCNNPECLFDGRDCEE 561


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 586 DHNQFAILQKLVFPKTSFQ 530
           D ++FA L+ +V  KTSF+
Sbjct: 293 DAHEFACLRAIVLFKTSFE 311


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 533 PGAFTSSEAKYSLNNSWNSAKETDDLPL 450
           P  FTSS   +S+N    +A+   D+ +
Sbjct: 360 PSGFTSSNHPFSINRLLPTAESKADIKM 387


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -1

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 255 GDLAVVIGVSAAQPIP 208
           GD+A+V+    A P+P
Sbjct: 182 GDIALVLPTQGASPLP 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,712
Number of Sequences: 336
Number of extensions: 3163
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)