Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8d15
         (448 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PH91 Cluster: ENSANGP00000024178; n=2; Culicidae|Rep:...    69   5e-11
UniRef50_Q9NRQ5 Cluster: UPF0443 protein C11orf75; n=18; Coeloma...    69   6e-11
UniRef50_UPI0000E47D66 Cluster: PREDICTED: similar to Fn5 protei...    48   7e-05
UniRef50_Q8SY72-2 Cluster: Isoform B of Q8SY72 ; n=1; Drosophila...    46   3e-04
UniRef50_A7RYM7 Cluster: Predicted protein; n=2; Nematostella ve...    46   3e-04
UniRef50_Q4PM94 Cluster: FN5 protein; n=2; Ixodoidea|Rep: FN5 pr...    40   0.032
UniRef50_A0CZM0 Cluster: Chromosome undetermined scaffold_32, wh...    34   1.2  
UniRef50_Q4UA28 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_A6M2Z2 Cluster: Carboxyl-terminal protease; n=1; Clostr...    32   4.9  
UniRef50_UPI00006CCCEA Cluster: hypothetical protein TTHERM_0034...    32   6.5  
UniRef50_Q49311 Cluster: Putative uncharacterized protein; n=1; ...    31   8.6  
UniRef50_A0E804 Cluster: Chromosome undetermined scaffold_82, wh...    31   8.6  
UniRef50_A0C026 Cluster: Chromosome undetermined scaffold_14, wh...    31   8.6  

>UniRef50_Q7PH91 Cluster: ENSANGP00000024178; n=2; Culicidae|Rep:
           ENSANGP00000024178 - Anopheles gambiae str. PEST
          Length = 60

 Score = 68.9 bits (161), Expect = 5e-11
 Identities = 33/55 (60%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = +2

Query: 65  MRKLKG-PVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRP 226
           MRKL+G   KET +Q++ERK+E  K+++Q+ TIVLPT+ VIFL I VYV++KTRP
Sbjct: 1   MRKLRGGQTKETRKQRQERKEENLKIQQQMKTIVLPTIGVIFLCIVVYVFLKTRP 55


>UniRef50_Q9NRQ5 Cluster: UPF0443 protein C11orf75; n=18;
           Coelomata|Rep: UPF0443 protein C11orf75 - Homo sapiens
           (Human)
          Length = 59

 Score = 68.5 bits (160), Expect = 6e-11
 Identities = 32/56 (57%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = +2

Query: 65  MRKLKG-PVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPS 229
           MR+LKG P KET++ K+ERKQ   + R+QI T+VLPT+ V+ LLI V+VY+ TRP+
Sbjct: 1   MRQLKGKPKKETSKDKKERKQAMQEARQQITTVVLPTLAVVVLLIVVFVYVATRPT 56


>UniRef50_UPI0000E47D66 Cluster: PREDICTED: similar to Fn5 protein,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Fn5 protein, partial -
           Strongylocentrotus purpuratus
          Length = 58

 Score = 48.4 bits (110), Expect = 7e-05
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +2

Query: 71  KLKGPV-KETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTMHD 241
           +LKG   KET ++KR RKQE    ++ +  +VLPT  +I   I  YVY K+RP    D
Sbjct: 1   QLKGKAQKETRKEKRSRKQENLDNKRNVLYVVLPTFALIACAIVFYVYYKSRPKIAFD 58


>UniRef50_Q8SY72-2 Cluster: Isoform B of Q8SY72 ; n=1; Drosophila
           melanogaster|Rep: Isoform B of Q8SY72 - Drosophila
           melanogaster (Fruit fly)
          Length = 234

 Score = 46.4 bits (105), Expect = 3e-04
 Identities = 21/47 (44%), Positives = 34/47 (72%)
 Frame = +2

Query: 65  MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVY 205
           MR+LKG VKET +QK+ERK +  + + +I T+VLP + V+ + + V+
Sbjct: 1   MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLFVH 47


>UniRef50_A7RYM7 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 62

 Score = 46.4 bits (105), Expect = 3e-04
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = +2

Query: 65  MRKLKGPV-KETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKT 220
           MR+L G   KET + KRERKQ+  +   ++ T+ +P  + +F+++ VYVY  T
Sbjct: 1   MRQLPGKAAKETRKMKRERKQQNKEGHNRVVTVAIPVCLAVFVMLIVYVYSAT 53


>UniRef50_Q4PM94 Cluster: FN5 protein; n=2; Ixodoidea|Rep: FN5
           protein - Ixodes scapularis (Black-legged tick) (Deer
           tick)
          Length = 59

 Score = 39.5 bits (88), Expect = 0.032
 Identities = 15/52 (28%), Positives = 34/52 (65%)
 Frame = +2

Query: 77  KGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPST 232
           K   + + + K ER+++  ++++++ ++V+P V+   ++I V V +KTRP T
Sbjct: 6   KNKPRLSRKDKEERRKDINEVQEKMFSVVIPVVITFAIVIVVIVLLKTRPRT 57


>UniRef50_A0CZM0 Cluster: Chromosome undetermined scaffold_32, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_32,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 205

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 118 KTRIRENAKTNSYDCVTNCRCNIFIN 195
           KT+I EN + N+Y C +NC+  I +N
Sbjct: 36  KTQIEENTQMNTYSCKSNCKIPILVN 61


>UniRef50_Q4UA28 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 509

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 19  LHTYFVYFCGFVSIEDEEAEGSRQRDS*AEKGKKTRIRENAK 144
           +H YF  F G + + D++ EGS       E   KT +RE  K
Sbjct: 329 IHYYFTPFDGLILLADKKVEGSMSMKDLPESFSKTTVRETFK 370


>UniRef50_A6M2Z2 Cluster: Carboxyl-terminal protease; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep:
           Carboxyl-terminal protease - Clostridium beijerinckii
           NCIMB 8052
          Length = 420

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 107 KRERKQEFAKMRKQIHTIVLPTVVVIFLLICV 202
           K  RK  FA  R+    I++PTV+ I  LICV
Sbjct: 2   KESRKYIFANRRQNRKIILIPTVIFIVFLICV 33


>UniRef50_UPI00006CCCEA Cluster: hypothetical protein TTHERM_00340180;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00340180 - Tetrahymena thermophila SB210
          Length = 2636

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = +2

Query: 23   IHILFIFADLLALKMRKLKG---PVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLL 193
            I I  +  D +  K+R++K     + E++ Q  ERKQ+  +     H  ++  ++ I + 
Sbjct: 2067 ICITIMVMDRILYKLRRIKSYFIDIHESSEQVEERKQDSTQ-----HAAIIKLIIHILIT 2121

Query: 194  ICVYVYI 214
            IC ++Y+
Sbjct: 2122 ICSHIYL 2128


>UniRef50_Q49311 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma genitalium|Rep: Putative uncharacterized
           protein - Mycoplasma genitalium
          Length = 84

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 339 VRDFVLYVYTMFITETFQVLPSISRCCLIKIFIEIK 446
           V D  L ++       F V+  +SR C +KIFIEIK
Sbjct: 49  VSDNFLPIFAYIALIWFSVIGGLSRICFLKIFIEIK 84


>UniRef50_A0E804 Cluster: Chromosome undetermined scaffold_82, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_82,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1140

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
 Frame = +2

Query: 89  KETARQKRERKQEFAKM--RKQIHTIV-LPTVVVIFLLICVYVYIKTRPSTMHDA*Q*LY 259
           KE   ++R+ KQ+  +   R + + I+    + + F+LI VY+Y    P    +A   ++
Sbjct: 7   KEFKHKQRQTKQQLYQFIQRDEFNLIIDCINMSISFILIFVYIYSTYEPEPFQNATWAVF 66

Query: 260 YVNRIYILDLFWGWFFKL*LGLN----VVASERLCAICLYYVYY 379
             N I  L L   W FKL    N    +++SE + AI     Y+
Sbjct: 67  --NTILHLLLLSEWIFKLYATKNFQSFIMSSESIIAILSLLPYF 108


>UniRef50_A0C026 Cluster: Chromosome undetermined scaffold_14, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_14,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1683

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +2

Query: 20  YIHILFIFADLLALKMRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLIC 199
           ++++  IF  LL L +  L   +     +K    +     RK I T    ++++ F++  
Sbjct: 173 FLNLFLIFLVLLTLILVVLDNILHIKVMEKPITMKIQGLERKNISTYRYISLIIEFIVQF 232

Query: 200 VYVYIKTRPSTMH 238
           +YV+ K +PST+H
Sbjct: 233 LYVFQKDQPSTLH 245


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,380,980
Number of Sequences: 1657284
Number of extensions: 7872229
Number of successful extensions: 20967
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20950
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)