Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8d15
(448 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071747-1|AAL49369.1| 58|Drosophila melanogaster RH56317p pro... 61 6e-10
AE014296-3726|AAN12206.1| 58|Drosophila melanogaster CG33169-P... 61 6e-10
AE014296-3725|AAO41287.1| 234|Drosophila melanogaster CG33169-P... 46 2e-05
L14849-1|AAA28748.1| 548|Drosophila melanogaster tyrosine phosp... 28 6.6
L11253-1|AAA75339.1| 548|Drosophila melanogaster protein ( D.me... 28 6.6
L11250-1|AAA75348.1| 548|Drosophila melanogaster protein ( D.me... 28 6.6
AE014296-244|AAN11476.1| 431|Drosophila melanogaster CG9181-PD,... 28 6.6
AE014296-243|AAF47487.1| 548|Drosophila melanogaster CG9181-PA,... 28 6.6
BT030434-1|ABO52854.1| 492|Drosophila melanogaster IP18315p pro... 27 8.7
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 27 8.7
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 27 8.7
AF145659-1|AAD38634.1| 594|Drosophila melanogaster BcDNA.GH1033... 27 8.7
AE014298-1053|AAF46268.1| 594|Drosophila melanogaster CG32721-P... 27 8.7
AE014296-247|AAN11477.1| 469|Drosophila melanogaster CG32320-PA... 27 8.7
>AY071747-1|AAL49369.1| 58|Drosophila melanogaster RH56317p
protein.
Length = 58
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/57 (45%), Positives = 43/57 (75%)
Frame = +2
Query: 65 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 235
MR+LKG VKET +QK+ERK + + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 1 MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57
>AE014296-3726|AAN12206.1| 58|Drosophila melanogaster CG33169-PA,
isoform A protein.
Length = 58
Score = 61.3 bits (142), Expect = 6e-10
Identities = 26/57 (45%), Positives = 43/57 (75%)
Frame = +2
Query: 65 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIKTRPSTM 235
MR+LKG VKET +QK+ERK + + + +I T+VLP + V+ + + ++VY+KTRP+ +
Sbjct: 1 MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLVLFVYLKTRPAVL 57
>AE014296-3725|AAO41287.1| 234|Drosophila melanogaster CG33169-PB,
isoform B protein.
Length = 234
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +2
Query: 65 MRKLKGPVKETARQKRERKQEFAKMRKQIHTIVLPTVVVIFLLICVY 205
MR+LKG VKET +QK+ERK + + + +I T+VLP + V+ + + V+
Sbjct: 1 MRQLKGKVKETRKQKKERKLDNLETQAKIRTVVLPALGVLAVFLFVH 47
>L14849-1|AAA28748.1| 548|Drosophila melanogaster tyrosine
phosphatase protein.
Length = 548
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 74 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 217
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>L11253-1|AAA75339.1| 548|Drosophila melanogaster protein (
D.melanogaster proteintyrosine phosphatase mRNA,
complete cds. ).
Length = 548
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 74 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 217
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>L11250-1|AAA75348.1| 548|Drosophila melanogaster protein (
D.melanogaster proteintyrosine phosphatase gene, exons
2-6 and complete cds.).
Length = 548
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 74 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 217
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>AE014296-244|AAN11476.1| 431|Drosophila melanogaster CG9181-PD,
isoform D protein.
Length = 431
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 74 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 217
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 382 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 429
>AE014296-243|AAF47487.1| 548|Drosophila melanogaster CG9181-PA,
isoform A protein.
Length = 548
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 74 LKGPVKETARQKRER--KQEFAKMRKQIHTIVLPTVVVIFLLICVYVYIK 217
L+ V + R++RE KQ AK R+ + T + VVV +IC Y Y K
Sbjct: 499 LEQKVNDMKRKQRENEDKQLAAKKRRSLLTYIAAGVVVG--VICAYAYTK 546
>BT030434-1|ABO52854.1| 492|Drosophila melanogaster IP18315p
protein.
Length = 492
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 107 KRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVY 211
+++ K+EF R ++H + L ++IF+L+ +Y
Sbjct: 106 EQDVKEEFEAQRHKLHFVYLWLNLIIFILLLTIIY 140
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 335 ASERLCAICLYYV-YYRNIPSFTKHIKVLFNKNI 433
++ R A C YY + RN +++HI L KN+
Sbjct: 138 SARRFVAFCNYYRRFIRNFADYSRHITRLCKKNV 171
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 335 ASERLCAICLYYV-YYRNIPSFTKHIKVLFNKNI 433
++ R A C YY + RN +++HI L KN+
Sbjct: 138 SARRFVAFCNYYRRFIRNFADYSRHITRLCKKNV 171
>AF145659-1|AAD38634.1| 594|Drosophila melanogaster BcDNA.GH10333
protein.
Length = 594
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -3
Query: 317 ITT*KTTPRISQECIFYLHNKVTAMRRASSTVAF*YT-----RTHKLIKILQRQLVTQSY 153
+T T R + ++Y+HNK+ A R A+ A T HKL +ILQ ++ T +
Sbjct: 506 LTRENVTSRHMLKLLWYVHNKLPAGRLATLMKAMQPTTAHNEHIHKLYEILQERIGTGAA 565
Query: 152 E 150
E
Sbjct: 566 E 566
>AE014298-1053|AAF46268.1| 594|Drosophila melanogaster CG32721-PA
protein.
Length = 594
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = -3
Query: 317 ITT*KTTPRISQECIFYLHNKVTAMRRASSTVAF*YT-----RTHKLIKILQRQLVTQSY 153
+T T R + ++Y+HNK+ A R A+ A T HKL +ILQ ++ T +
Sbjct: 506 LTRENVTSRHMLKLLWYVHNKLPAGRLATLMKAMQPTTAHNEHIHKLYEILQERIGTGAA 565
Query: 152 E 150
E
Sbjct: 566 E 566
>AE014296-247|AAN11477.1| 469|Drosophila melanogaster CG32320-PA
protein.
Length = 469
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 107 KRERKQEFAKMRKQIHTIVLPTVVVIFLLICVYVY 211
+++ K+EF R ++H + L ++IF+L+ +Y
Sbjct: 180 EQDVKEEFEAQRHKLHFVYLWLNLIIFILLLTIIY 214
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,157,611
Number of Sequences: 53049
Number of extensions: 370480
Number of successful extensions: 1370
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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