Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8d11
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499CD1 Cluster: hypothetical protein 26.t00065; ...    33   4.7  
UniRef50_Q4N7X3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_Q7S5S4 Cluster: Putative uncharacterized protein NCU056...    32   8.2  
UniRef50_Q2GRU7 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_UPI0000499CD1 Cluster: hypothetical protein 26.t00065;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 26.t00065 - Entamoeba histolytica HM-1:IMSS
          Length = 873

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 262 TDRQIKLFKKHYTCIISPLCICTRHLLNIENRFDCKIKF 146
           T +++K  KK+YT +  P  IC + +LN  N  D  I+F
Sbjct: 51  TQKEMKYLKKYYTLLTIPNQICLKTILNRVNVNDISIEF 89


>UniRef50_Q4N7X3 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 285

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +3

Query: 105 PKVNLILLVRVLSLNFILQSKRFSIFNKCRVQIHKGLIIQV*CFLNNFICLSVFD*WIGV 284
           P + L+LL    SL FI  S  FSIF    + +   +I +   F     C  + + W+ V
Sbjct: 47  PLMELVLLSPRRSLIFIRFSILFSIFISVMLLLPDLIIAKFDQFSCQN-CFKILNTWLYV 105

Query: 285 YACFLISYF*RFILFYC 335
           Y   L+  F   +LFYC
Sbjct: 106 YRMVLLMQFSFRVLFYC 122


>UniRef50_Q7S5S4 Cluster: Putative uncharacterized protein
           NCU05634.1; n=2; Pezizomycotina|Rep: Putative
           uncharacterized protein NCU05634.1 - Neurospora crassa
          Length = 1716

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +3

Query: 75  SLGAILRTYSPKVNLILLVRVLSLNFILQSKRFSIFNKCRVQIHKGLIIQV 227
           +L ++L  Y+  V   LLV  L+++FILQS + +I N       + L++ V
Sbjct: 117 ALPSLLSNYAADVKGELLVTALNISFILQSSKNAIVNNASAATLQQLVVSV 167


>UniRef50_Q2GRU7 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1534

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 75  SLGAILRTYSPKVNLILLVRVLSLNFILQSKRFSIFNKCRVQIHKGLIIQV 227
           +L A+L  YS  V   LLV  L++ FILQS + +I N       + L++ V
Sbjct: 35  ALPALLSNYSADVKGDLLVTALNVCFILQSSKNAIVNNTSAATLQQLVVSV 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,950,502
Number of Sequences: 1657284
Number of extensions: 9183039
Number of successful extensions: 18011
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18005
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)