BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8d08
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1; P... 35 0.80
UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_A0G452 Cluster: Filamentous haemagglutinin family outer... 33 3.2
UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila melanogaste... 33 3.2
UniRef50_Q20576 Cluster: Putative uncharacterized protein pqn-39... 32 5.6
UniRef50_A6GBC3 Cluster: Peptidase S9B, dipeptidylpeptidase IV d... 32 7.4
UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium glob... 32 7.4
UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n... 32 7.4
UniRef50_UPI0000DD7C34 Cluster: PREDICTED: similar to Hornerin; ... 31 9.8
UniRef50_Q89H69 Cluster: Bll6125 protein; n=1; Bradyrhizobium ja... 31 9.8
UniRef50_A7A7K5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.8
UniRef50_Q4UHA1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.8
UniRef50_Q55YE8 Cluster: Putative uncharacterized protein; n=2; ... 31 9.8
>UniRef50_A6BYX8 Cluster: Putative inner membrane protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative inner membrane
protein - Planctomyces maris DSM 8797
Length = 5594
Score = 35.1 bits (77), Expect = 0.80
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 333 DNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSD 166
D G + S + +SGN VHDE + + G+ +S D+R+ ++GS T +++
Sbjct: 4038 DRYSAGAETSNEL-TSSGNSHVHDEYRTQNVSSGSHQSVDSRTPVNGSKSVTVIAN 4092
>UniRef50_A0Z076 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 981
Score = 33.9 bits (74), Expect = 1.8
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = -3
Query: 345 SLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHY 181
S G N+G G F + N+ GN+D E ++ GTG ++ +DN++ +G++ +
Sbjct: 289 SFGGGNSGGGGGFGSNTPNSGGNIDT-GENNENLGTGNSAFGSDNQTEGNGNNAF 342
>UniRef50_A0G452 Cluster: Filamentous haemagglutinin family outer
membrane protein; n=1; Burkholderia phymatum STM815|Rep:
Filamentous haemagglutinin family outer membrane protein
- Burkholderia phymatum STM815
Length = 2782
Score = 33.1 bits (72), Expect = 3.2
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -3
Query: 369 DRDNGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRG--TGGNSRSNDNRSGLH 196
D NG + +L G N V + +G++ NTSG + L TGG + S N ++
Sbjct: 883 DNSNGQIGNLTGSNGDVTIAATGALTNTSGQIGATHNLSVNAAGLTGGGAYSAANDVAIN 942
Query: 195 GSSHYTTVSD 166
++ D
Sbjct: 943 VQGNFAPTPD 952
>UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila
melanogaster|Rep: CG32241-PA - Drosophila melanogaster
(Fruit fly)
Length = 440
Score = 33.1 bits (72), Expect = 3.2
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 31 KMKFLVAFALIAVASARVFEPISVGPALVDT---YEPIDTEPAYVDIP 165
K KFL+AFAL+AVASA V S L + Y P + P +D+P
Sbjct: 25 KQKFLIAFALVAVASADVSHLFSNSNNLQEDGYHYAP-PSAPVVIDVP 71
>UniRef50_Q20576 Cluster: Putative uncharacterized protein pqn-39;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein pqn-39 - Caenorhabditis elegans
Length = 925
Score = 32.3 bits (70), Expect = 5.6
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 360 NGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSH 184
N + +L +NG + SGS+RN N + + K RG GN++ N + H +H
Sbjct: 535 NSSTSALTPRSNGQKKETSGSVRNEGSNNNSQNRNTKYRGAVGNNQHMYNGNEGHSGAH 593
>UniRef50_A6GBC3 Cluster: Peptidase S9B, dipeptidylpeptidase IV
domain protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Peptidase S9B, dipeptidylpeptidase IV domain protein -
Plesiocystis pacifica SIR-1
Length = 842
Score = 31.9 bits (69), Expect = 7.4
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -3
Query: 372 RDRDNGAL-FSLFGDNNGV---GLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRS 205
R RD+G L F L DN G GL F G++R+ GNV+V D++ ++ +R
Sbjct: 647 RLRDHGYLVFKL--DNRGAARRGLAFEGALRHDMGNVEVQDQVAGVNWLVEQGLTDKDRV 704
Query: 204 GLHGSSH 184
++G S+
Sbjct: 705 AIYGWSY 711
>UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 490
Score = 31.9 bits (69), Expect = 7.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 291 NTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSDR 163
N + N H H+RR + G +D R +HGS+ ++ + R
Sbjct: 381 NNNNNNHTHTHTHQRRQSEGLGTRHDARGYMHGSTEHSAIPPR 423
>UniRef50_Q18211 Cluster: Regulator of chromosome condensation; n=2;
Caenorhabditis|Rep: Regulator of chromosome condensation
- Caenorhabditis elegans
Length = 569
Score = 31.9 bits (69), Expect = 7.4
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 303 GSIRNTSGNVDVHDELHK 250
G++RN++GNVDVH LHK
Sbjct: 269 GNLRNSNGNVDVHPLLHK 286
>UniRef50_UPI0000DD7C34 Cluster: PREDICTED: similar to Hornerin;
n=2; Homo sapiens|Rep: PREDICTED: similar to Hornerin -
Homo sapiens
Length = 962
Score = 31.5 bits (68), Expect = 9.8
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 360 NGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHY 181
N L + G + GL + S +T+ + LH G NSR + N SG H + +
Sbjct: 553 NSRLHTNSGFHTNTGLHTNNSGFHTNSEFHTNSGLHTNSGFHTNSRFHTNNSGFHTNLGF 612
Query: 180 TTVSD 166
T S+
Sbjct: 613 HTNSE 617
>UniRef50_Q89H69 Cluster: Bll6125 protein; n=1; Bradyrhizobium
japonicum|Rep: Bll6125 protein - Bradyrhizobium
japonicum
Length = 406
Score = 31.5 bits (68), Expect = 9.8
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 357 GALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHY 181
G+ + G ++G G + +G+ N SG + + G GN + DN +G HG HY
Sbjct: 342 GSTGDVSGGSSGSGSNGTGATSNGSGGTGNNG--NNGNGNSGNGNNGDNGNGSHG-HHY 397
>UniRef50_A7A7K5 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 501
Score = 31.5 bits (68), Expect = 9.8
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 336 GDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSG 202
G G G G+ +T GN D + G GGN SNDN +G
Sbjct: 441 GSTGGNGGSNDGNGGSTGGNGDSNGNGGSTGGNGGNGDSNDNGNG 485
>UniRef50_Q4UHA1 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 462
Score = 31.5 bits (68), Expect = 9.8
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -3
Query: 312 DFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYTTVSD 166
D GS + SG+ V D ++RR + +SRS+ + S + SS ++ SD
Sbjct: 339 DRDGSSTSDSGSSSVSDSTYRRRSSTSSSRSSTSDSRSYSSSTSSSRSD 387
>UniRef50_Q55YE8 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 751
Score = 31.5 bits (68), Expect = 9.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 336 GDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSR 223
G + G+G D SGS SGN D D + GTGG +
Sbjct: 336 GGDGGMGQDGSGSGSGGSGNGDDGDNKGRGNGTGGKGK 373
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,873,188
Number of Sequences: 1657284
Number of extensions: 3555273
Number of successful extensions: 16161
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15910
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -