Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8c14
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   5.4  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   9.4  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   9.4  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   9.4  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   9.4  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 454 VMNAVEMNTYNNENVSRLINDPKQK 528
           +++A ++ +YNN N  R++  P Q+
Sbjct: 756 IVDAPQVISYNNMNNRRIVPSPNQQ 780


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 LVVFSMPGKSHSILGYGIVKHLLKRGHEVTYIT 309
           L+VF + G    +L    +KH+++ G  + +IT
Sbjct: 372 LIVFGVIGHLAHVLEAPDIKHVVRGGAGLAFIT 404


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 371 SMLLLTSICLSFGSALSTGNGVMYVTSCPLFSKCFTIPYP 252
           ++L+LTS+ +    A+    G +Y     +F K   + YP
Sbjct: 129 TVLILTSVLIFGLCAIYPHTGYLYYYHYQIFPKISLVVYP 168


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 211 LVVFSMPGKSHSILGYGIVKHLLKRGHEVTYIT 309
           L+VF + G    +L    +KH+++ G  + +IT
Sbjct: 372 LIVFGVIGHLAHVLEAPDIKHVVRGGAGLAFIT 404


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 184 LCTCDAYKVLVVFSMPGKSHSI 249
           +C     KV V+FS  GK+H I
Sbjct: 133 ICGPGTKKVHVIFSYKGKNHLI 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,278
Number of Sequences: 2352
Number of extensions: 12082
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)