Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8c14
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537837-1|CAD97849.1| 1523|Homo sapiens hypothetical protein pr... 32 1.7
BC090927-1|AAH90927.1| 997|Homo sapiens SYNE1 protein protein. 32 1.7
AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein. 32 1.7
AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein. 32 1.7
AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat contain... 32 1.7
AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat contain... 32 1.7
AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat contain... 32 1.7
AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat contain... 32 1.7
AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat contain... 32 1.7
AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat contain... 32 1.7
AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat contain... 32 1.7
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 32 1.7
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 32 1.7
AF444779-1|AAL38031.1| 1139|Homo sapiens myocyte inner nuclear m... 32 1.7
AB018339-1|BAA34516.2| 1876|Homo sapiens KIAA0796 protein protein. 32 1.7
L38928-1|AAC41945.1| 203|Homo sapiens 5,10-methenyltetrahydrofo... 30 5.1
BC019921-1|AAH19921.1| 203|Homo sapiens 5,10-methenyltetrahydro... 30 5.1
BC012417-1|AAH12417.1| 193|Homo sapiens MTHFS protein protein. 30 5.1
>BX537837-1|CAD97849.1| 1523|Homo sapiens hypothetical protein
protein.
Length = 1523
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 467 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 510
>BC090927-1|AAH90927.1| 997|Homo sapiens SYNE1 protein protein.
Length = 997
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 29 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 72
>AY184206-1|AAO27774.1| 3212|Homo sapiens nesprin-1 beta 2 protein.
Length = 3212
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 2156 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 2199
>AY061755-1|AAL33798.1| 3321|Homo sapiens nesprin-1 beta protein.
Length = 3321
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 2265 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 2308
>AL450401-4|CAI40730.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 1884 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 1927
>AL450401-3|CAI40729.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 2265 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 2308
>AL357081-1|CAI41322.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 2265 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 2308
>AL138832-5|CAI42787.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 1884 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 1927
>AL138832-4|CAI42786.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 2265 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 2308
>AL078582-5|CAI42287.1| 2963|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 2963
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 1884 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 1927
>AL078582-3|CAI42284.1| 3321|Homo sapiens spectrin repeat containing,
nuclear envelope 1 protein.
Length = 3321
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 2265 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 2308
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 7670 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 7713
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 7741 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 7784
>AF444779-1|AAL38031.1| 1139|Homo sapiens myocyte inner nuclear
membrane protein protein.
Length = 1139
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 83 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 126
>AB018339-1|BAA34516.2| 1876|Homo sapiens KIAA0796 protein protein.
Length = 1876
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -2
Query: 369 YVTAN-VDLFELRIRVIHRKWGYVCHLMSPFQQMLYNSISEYAV 241
Y++A+ + + R+ ++ R+W +CH +S +Q + ++E+AV
Sbjct: 820 YISADDISILNERVELLQRQWEELCHQLSLRRQQIGERLNEWAV 863
>L38928-1|AAC41945.1| 203|Homo sapiens
5,10-methenyltetrahydrofolate synthetase protein.
Length = 203
Score = 30.3 bits (65), Expect = 5.1
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 262 IVKHLLKRGHEVTYITPFPVDNADPKLKQIDVSSNIDILPKTSLNLNVILEGKVPK--VD 435
I+K + +RG ++ +I + + + +I+ I +LPKTS N+ EG V + +
Sbjct: 67 IIKDIFQRG-KICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALS 125
Query: 436 HGGIHLV 456
GG+ L+
Sbjct: 126 TGGLDLI 132
>BC019921-1|AAH19921.1| 203|Homo sapiens
5,10-methenyltetrahydrofolate synthetase
(5-formyltetrahydrofolate cyclo-ligase protein.
Length = 203
Score = 30.3 bits (65), Expect = 5.1
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 262 IVKHLLKRGHEVTYITPFPVDNADPKLKQIDVSSNIDILPKTSLNLNVILEGKVPK--VD 435
I+K + +RG ++ +I + + + +I+ I +LPKTS N+ EG V + +
Sbjct: 67 IIKDIFQRG-KICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALS 125
Query: 436 HGGIHLV 456
GG+ L+
Sbjct: 126 TGGLDLI 132
>BC012417-1|AAH12417.1| 193|Homo sapiens MTHFS protein protein.
Length = 193
Score = 30.3 bits (65), Expect = 5.1
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 262 IVKHLLKRGHEVTYITPFPVDNADPKLKQIDVSSNIDILPKTSLNLNVILEGKVPK--VD 435
I+K + +RG ++ +I + + + +I+ I +LPKTS N+ EG V + +
Sbjct: 57 IIKDIFQRG-KICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALS 115
Query: 436 HGGIHLV 456
GG+ L+
Sbjct: 116 TGGLDLI 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,041,407
Number of Sequences: 237096
Number of extensions: 1701866
Number of successful extensions: 3406
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3406
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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