Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8c10
(576 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 41 1e-04
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.013
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 33 0.023
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 30 0.21
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 30 0.28
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.28
SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual 29 0.37
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 0.37
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 29 0.37
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.49
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 29 0.64
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 1.5
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 2.0
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 27 2.0
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 2.0
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 27 2.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.4
SPBC4.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Ma... 26 3.4
SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos... 26 4.5
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 26 4.5
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.5
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 26 4.5
SPBC14C8.04 |||acetolactate synthase regulatory unit|Schizosacch... 26 4.5
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 6.0
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 25 6.0
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.0
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 25 6.0
SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr 2... 25 6.0
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 7.9
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 25 7.9
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 25 7.9
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.9
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +2
Query: 338 ERLEKEQELQKVSVKKDDIELIVKELEISRTLAERTLREHSGDVVAALTTLT 493
E E+E+ + + V DIEL++ + +SR A L+E++ DVV A+ +LT
Sbjct: 121 ESFEQEKAVDETGVDAKDIELVMAQANVSRAKAVTALKENNSDVVNAIMSLT 172
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 34.3 bits (75), Expect = 0.013
Identities = 28/93 (30%), Positives = 50/93 (53%)
Frame = -1
Query: 495 LVSVVSAATTSPLCSRNVLSASVLEISNSLTINSMSSFLTETFCNSCSFSKRSAASLFLR 316
++S S++++SP + + +S+S S+S + S SS ++ + +S SFS ++S
Sbjct: 272 IISSSSSSSSSPTSTSSTISSSS---SSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSS 328
Query: 315 SPINESAPDMSWEDISISSA*SVTFSKSATPLS 217
S S+P S IS SS+ + S S+T S
Sbjct: 329 SSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSS 361
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 33.5 bits (73), Expect = 0.023
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Frame = +2
Query: 167 DDIQHDKDKTQKKTAKHDSGVADL-EKVTDYAEEMEISSQDISGA------LSLIGDRRN 325
DD +K +K + +A+ EK+ EE+E DI G + + D N
Sbjct: 922 DDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVDIIGLQNASLNMQSLKDSDN 981
Query: 326 KEAAERLEKEQELQKVSVKKDDIEL-IVKELEISRTLAERTLRE 454
+ ++ K +EL+K + D+ L IV+ELE RT + LR+
Sbjct: 982 RTISDLESKNKELEKKLKEADEYWLLIVEELESKRTKDKELLRQ 1025
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 30.3 bits (65), Expect = 0.21
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +2
Query: 134 EMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLE---KVTDYAEEMEISSQDISGALS 304
E+ +E G + +Q K K ++ KH +D E K TD + + +
Sbjct: 121 EILPKEPAGSKEAMQQKK-KEKRAALKHYREASDNEEDLKETDLYGDRDSFQSRLKQKKQ 179
Query: 305 LIGDRRNKEAAERLEKEQELQ-KVSVK-KDDIELIVKELEISR 427
R +K ERLE++QEL+ K+ + K ++E I K E+++
Sbjct: 180 RSEFRASKREMERLERDQELRNKIEERNKKELETIEKLRELAK 222
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.9 bits (64), Expect = 0.28
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = -1
Query: 501 YQLVSVVSAATTSPLCSRNVLSASVLEISNSLTINSMSSFLTETFCNSCSFSKRSAASLF 322
Y+ S S+ T + S + S++ + +++S T +S SS + T ++ S S
Sbjct: 254 YETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTSSSGSSQDSTTIDSTPSTIATSTLQPT 313
Query: 321 LRSPINESAPDMS 283
SPI SAP +S
Sbjct: 314 TSSPITTSAPSLS 326
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.28
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -1
Query: 504 PYQLVSVVSAATTSPLCSRNVLSASVLEISNSLTINSMSSFL--TETFCNSCSFSKRSAA 331
P ++ S ++ TT S +++ S S++ T S SS L T T C + + +
Sbjct: 69 PVEITS--TSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGG 126
Query: 330 SLFLRSPINESAPDMSWEDISI 265
S L +PI + P S SI
Sbjct: 127 SSSLSTPITPTVPPTSTSSTSI 148
>SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 450
Score = 29.5 bits (63), Expect = 0.37
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 134 EMADEEINGDTDDIQHDK-DKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDI 289
E + EE++ + IQ + D+T + A HDS K EE E SS D+
Sbjct: 352 EASFEEVDDAKESIQEKEIDETTESKATHDSSETSSSKELPKEEEKESSSFDL 404
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.5 bits (63), Expect = 0.37
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Frame = +2
Query: 143 DEEINGDTDDIQHDKDK--TQKKTAKH-DSGVADLEKVTDYAEEMEISSQD-ISGALSLI 310
++++ T+ ++ ++ Q K+A+ DS + LE+ + E+ Q +SG S +
Sbjct: 267 NQDLYNQTEALKSTNEELINQIKSAEELDSAIQVLEERYRTMQRDEVKFQSAMSGMKSKM 326
Query: 311 GDRRN--KEAAERLE-KEQELQKVSVKKDDIELIVKELEISRTLAERTLRE 454
R N K+ +E KE +LQ + K+D ++ V+ +IS + E+ + E
Sbjct: 327 ESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDISISEFEKMVSE 377
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 29.5 bits (63), Expect = 0.37
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = +2
Query: 125 NKLEMADEEINGDTDDIQHDKDKTQKKTAKHD--SGVADLE-KVTDYAEEMEISSQDISG 295
N+ E DEE + + ++ + + ++K A+HD + D+E +V + EE+E +I
Sbjct: 110 NEEEEEDEEDDEEDEEDEDESGGGRRKRARHDRRNQFLDIEAEVDEDEEELEDEEDEIGR 169
Query: 296 ALSLIGDRRNKE--AAERLEKEQELQKVSVKKDDIELIVKE 412
I + + +R +E + Q+ ++ D E + +E
Sbjct: 170 EDGFIEEEVGADYVGDDRRHRELDRQRQELQSVDAERLAEE 210
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 0.49
Identities = 20/115 (17%), Positives = 52/115 (45%)
Frame = +2
Query: 122 YNKLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGAL 301
+N ++ ++ + D++ + +KK +K S A +A+E + ++ +
Sbjct: 49 FNSDNDSNYDLKPEDDEVDEEVVPVKKKPSKK-SKKAKANAFEAFADEQSVEEEEEEDSE 107
Query: 302 SLIGDRRNKEAAERLEKEQELQKVSVKKDDIELIVKELEISRTLAERTLREHSGD 466
+ R+NK+++++ + ++ DD+ L +E E S ++ + S D
Sbjct: 108 KPV--RKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKD 160
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 28.7 bits (61), Expect = 0.64
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 453 SRNVLSASVLEISNSLTINSMSSFLTETFCNSCSFSKRSAASLFLRSPINESAPDMS 283
S N SV S +L S + ++ N ++R A +LRSP++ S+P S
Sbjct: 298 STNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSAS 354
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 1.5
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = -1
Query: 516 CQLCPYQLVSVVSAATTSPLCSRNVLSASVLEISNSLTINSMSSFLTETFCNSCSFSKRS 337
C P + +S VS TTS + SAS+ S T++ +S L+ + +S S S
Sbjct: 579 CSSRPEETISTVS--TTSTVSESGSSSASITSTYPSSTLSMTTSHLSSSSVHSSSAHSSS 636
Query: 336 AASLFLRSP 310
+ S + P
Sbjct: 637 SRSSSMSLP 645
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.1 bits (57), Expect = 2.0
Identities = 17/80 (21%), Positives = 41/80 (51%)
Frame = +2
Query: 152 INGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKE 331
++GD DD Q + + + K + ++E +++ ++ + I ++ ++
Sbjct: 424 LSGDADDFQANSNPFEDDD-KLEGANGEMEVTFTSGFDVDNNANSSEKDETTI-EKYKRK 481
Query: 332 AAERLEKEQELQKVSVKKDD 391
AAER ++ +EL+++ KDD
Sbjct: 482 AAERKQRRKELRQLKKTKDD 501
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 417 SNSLTINSMSSFLTET-FCNSCSFSKRSAASLFLRSPINESAP 292
S S +N ++ T+ F N C F+K S F R N AP
Sbjct: 39 SGSSVLNEINLSRTKNLFLNDCKFNKNSFEKFFARRLSNSVAP 81
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 2.0
Identities = 29/97 (29%), Positives = 46/97 (47%)
Frame = +2
Query: 161 DTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAE 340
DT+ I D+D ++ + H VA+ EK+ D EE I + L + ++ E
Sbjct: 408 DTEVIIEDQDN--QEISNH---VAE-EKI-DSDEEETIDDAKSEMFVDLSEEEEVRQYEE 460
Query: 341 RLEKEQELQKVSVKKDDIELIVKELEISRTLAERTLR 451
+K++ELQ+ D++EL EL R R LR
Sbjct: 461 YRKKQKELQEELEFPDEVELQPNELARERFKKYRGLR 497
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 2.6
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Frame = +2
Query: 134 EMADEEINGDTDDIQHDK--------DKTQKKT--AKHDSGVADLEKVTDYAEEMEISSQ 283
E DEE+ G+ ++ + +K D+T+ K + DS + ++ +D + +++++
Sbjct: 270 EDEDEELEGEKEEEEEEKEKPEISNYDETEGKVNFSLEDSESLEFDEGSDDYDYAKLTTE 329
Query: 284 DISGALSLIGDRRNKEAAERLEKEQELQKVSVKKDDIELIVKELEISRTL 433
+ SL D + + E E+EL + DD E I L I TL
Sbjct: 330 LVGNTDSLAEDEDDILEEDEDEDEEELLAIFDASDDSE-IEAYLSIGDTL 378
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 2.6
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = -1
Query: 486 VVSAATTSPLCSRNVLSASVLEISNSLTINSMSSFLTETFCNSCSFSKRSAASLFLRSPI 307
+ S++ S S + + +S +S +++ SS + TF ++ + S S +S S
Sbjct: 564 ISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSST 623
Query: 306 NESAPDMSWEDISISSA*SVTFSKS 232
S+P S + ISS+ ++ S S
Sbjct: 624 ILSSPTPSTSSLMISSSSIISGSSS 648
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 3.4
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -1
Query: 504 PYQLVSVVSAATTSPLCSRNVLSASVLEISNSLTINSMSSFLTETFCNSCSFSKRSAASL 325
P S++S+++ + + S + S+S L S+S T + SSF+T +S S S+ASL
Sbjct: 42 PSSSSSMLSSSSATAISSSS--SSSPLS-SSSFTSPASSSFITSLVSSSSQQSSSSSASL 98
Score = 25.4 bits (53), Expect = 6.0
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -1
Query: 399 NSMSSFLTETFCNSCSFSKRSAASLFLRSPINESA--PDMSWEDISISSA*SVTFSKSAT 226
N+ SS T ++ S S++S + ++ S+ P S +S SSA +++ S S++
Sbjct: 5 NNTSSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSS 64
Query: 225 PLS 217
PLS
Sbjct: 65 PLS 67
>SPBC4.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 248
Score = 26.2 bits (55), Expect = 3.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 289 YVLGGYFHFFSIIS-NFFQV-RHSAIMFSGFLLSFVFVMLNIICITIDFFVC 140
++ G+F FS+I + + R+ +F LSF F+ + I +F+C
Sbjct: 194 WISSGFFLLFSLIHLGLWTIERNKQKLFEETSLSFSFITTKLRLIETQYFIC 245
>SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 790
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 167 DDIQHDKDKTQKKTAKHDSGVADLEKV-TDYAEEMEISSQDISGALSLIGD 316
DD++ + +K T V +L +V D+AE ME+ Q+ A LIGD
Sbjct: 404 DDLEQSRIIFEKATHVPYKTVNELAQVWIDWAE-MELRHQNFDAARKLIGD 453
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 21 RESCETLRKCYKRRFCSFKFT*RLDSVDNGE 113
RE+C+ + ++R F K LDS D+G+
Sbjct: 317 RENCQITKLDFEREFSQLKLKDLLDSRDSGK 347
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 338 ERLEKEQELQKVSVKKDDIELIVKELEISRTLAERTLREHSGDVVAALTTL 490
E L K E+ + +EL++ + SR L+EH +V AL L
Sbjct: 379 EILTKLLEIYSYRISAHHVELLMALVVCSRNYMRCNLQEHHNAIVQALQNL 429
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 287 ISGALSLIGDRRNKEAAERLEKEQELQKVSVKKDDIELIVK 409
+SG S +G+R K++ E + + +Q++ D E +K
Sbjct: 86 VSGIKSTLGERLKKDSQELAQNRKRIQELEKSLGDAEEALK 126
>SPBC14C8.04 |||acetolactate synthase regulatory
unit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 289
Score = 25.8 bits (54), Expect = 4.5
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +2
Query: 188 DKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAERLEKEQELQ 367
D+ ++ + + + V DY + + + +SL+G +E ER EK E
Sbjct: 122 DEVVEQAKRQIEDIVSVWAVLDYTGTSMVERELLLAKVSLLGPDHFQEHFERSEKVAEST 181
Query: 368 KVSVKKD 388
K D
Sbjct: 182 NAKAKSD 188
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/75 (21%), Positives = 36/75 (48%)
Frame = +2
Query: 170 DIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAERLE 349
D+ ++ T++ +++ G + +EK + + ++ D+S + + +RN + LE
Sbjct: 430 DVYREQLNTER-ARENNLGGSQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLE 488
Query: 350 KEQELQKVSVKKDDI 394
L + KKD I
Sbjct: 489 MGGNLTSLLTKKDSI 503
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 25.4 bits (53), Expect = 6.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -1
Query: 426 LEISNSLTINSMS-SFLTETFCNSCSFSKRSAASLFLRSPINESAPDMSWEDISIS 262
L+++ SL + ++S S T ++ S S + A + R+ + E PD SWE I +S
Sbjct: 193 LQVAASLLLPALSGSCALLTSYSAKSKSLQVACTGDSRAVLGECTPDGSWEAIPLS 248
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 402 INSMSSFLTETFCNSCSFSKRSAASLF 322
IN+ S+ +F ++C+FS +SAASL+
Sbjct: 254 INNHSNVFRRSF-HTCNFSLKSAASLY 279
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 6.0
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 248 TDYAEEMEISSQ--DISGALSLIGDR--RNKEAAERLEKEQELQKVSVKKDDIELIVKEL 415
+ Y +E E +++ +S +S+I R K R+ +EQE + + +D+E+ +E
Sbjct: 95 SSYEDETETANKLSRVSSLVSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQES 154
Query: 416 EISRTLAER 442
+ LAE+
Sbjct: 155 LENNGLAEK 163
>SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 304
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 138 WQTKKSMVIQMIFSMTKTKLKRKPLNMIAE 227
+QT+ + S ++T LK KP N+ AE
Sbjct: 231 FQTRNTPTFSFSSSSSQTSLKHKPKNVFAE 260
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.0 bits (52), Expect = 7.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 167 DDIQHDKDKTQKKTAKHDSGVADL 238
D IQ KDKTQ++ H +ADL
Sbjct: 129 DIIQLYKDKTQERKLPHVFAIADL 152
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 25.0 bits (52), Expect = 7.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 254 YAEEMEISSQDISGALSLIGDRRNKEAAERLEKEQELQKVSVKKDDIELIVK 409
Y + +E S I S I R KE + ++ Q V++K++DI LI K
Sbjct: 27 YQQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCH-QNVNIKREDITLITK 77
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/99 (15%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +2
Query: 107 RRTCKYNKLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQD 286
R+ + + E+ +E ++ ++D+ + KK + + E +S ++
Sbjct: 18 RKLQRQRQTELLEEALDSESDEDDEFSSTSGKKVVNVFEILEKENNAINSEAEKSVSEEE 77
Query: 287 -----ISGALSLIGDRRNKEAAERLEKEQELQKVSVKKD 388
+ G ++ + + ++ +K+Q+ +KV+ K+D
Sbjct: 78 QDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKRD 116
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 25.0 bits (52), Expect = 7.9
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +2
Query: 149 EINGDTDDIQHDKD-KTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRN 325
E+ DT + KD ++T + + + + D+A E EI Q + SL
Sbjct: 176 EVTKDTAEESVWKDIGLDQETGLSVTAIPIITETLDHAHEQEIKDQSLRFESSLNEANEL 235
Query: 326 KEAAERLEKEQE---LQKVSVKKDDIELIVKELEISR 427
++++EQE Q++ K ++E ++ L I+R
Sbjct: 236 HGKLSKIQQEQEHLFEQRLREKVSEMESKLEALLIAR 272
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,092,705
Number of Sequences: 5004
Number of extensions: 37045
Number of successful extensions: 195
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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