Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8b18
         (223 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YN85 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q23R22 Cluster: Dynein heavy chain family protein; n=1;...    32   2.9  

>UniRef50_Q4YN85 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 984

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 99  FEHVNIFSSSERYEQITSSFSIYTRNILTLIKN 1
           + H+N F   + Y+    +F I+T+N+LTL KN
Sbjct: 580 YNHLNKFKFKDFYQNKYINFLIFTKNVLTLPKN 612


>UniRef50_Q23R22 Cluster: Dynein heavy chain family protein; n=1;
            Tetrahymena thermophila SB210|Rep: Dynein heavy chain
            family protein - Tetrahymena thermophila SB210
          Length = 4722

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = -1

Query: 73   LRTLRTDYFVVFNLHKKYFNFNK 5
            L+ L+TD+ ++ N+HK+YF +N+
Sbjct: 1272 LKWLKTDFQIITNIHKEYFPYNR 1294


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,161,341
Number of Sequences: 1657284
Number of extensions: 756376
Number of successful extensions: 2336
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2336
length of database: 575,637,011
effective HSP length: 52
effective length of database: 489,458,243
effective search space used: 10278623103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)