Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8b18
         (223 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    19   7.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   9.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   9.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   9.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   9.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    19   9.5  

>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
          protein.
          Length = 134

 Score = 19.0 bits (37), Expect = 7.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 74 PQNVTNRLLRRFQ 36
          P+ + NR+ RRF+
Sbjct: 37 PKGIDNRVRRRFK 49


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 55  DYFVVFNLHKKYFN 14
           DY+  + +H+K +N
Sbjct: 427 DYYHSYKMHQKPYN 440


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 55  DYFVVFNLHKKYFN 14
           DY+  + +H+K +N
Sbjct: 427 DYYHSYKMHQKPYN 440


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 108 KLYFEHVNIFSSS 70
           +LY+ HV  +SSS
Sbjct: 269 QLYYPHVPEYSSS 281


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 108 KLYFEHVNIFSSS 70
           +LY+ HV  +SSS
Sbjct: 284 QLYYPHVPEYSSS 296


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 70  RTLRTDYFVVFNLHKKYF 17
           R + T+ +  FNL  KY+
Sbjct: 287 RMILTEAYTEFNLTIKYY 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,010
Number of Sequences: 438
Number of extensions: 235
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3407265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)