Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8b15
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 233 2e-61
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 233 2e-61
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 233 2e-61
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 233 2e-61
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 233 2e-61
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 233 2e-61
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 190 3e-48
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 147 2e-35
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 83 4e-16
X04325-1|CAA27856.1| 283|Homo sapiens protein ( Human liver mRN... 29 9.5
BT019329-1|AAV38136.1| 283|Homo sapiens gap junction protein, b... 29 9.5
BC039198-1|AAH39198.1| 283|Homo sapiens GJB1 protein protein. 29 9.5
BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein. 29 9.5
BC022426-1|AAH22426.1| 283|Homo sapiens gap junction protein, b... 29 9.5
BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein. 29 9.5
BC002805-1|AAH02805.1| 283|Homo sapiens gap junction protein, b... 29 9.5
AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein FL... 29 9.5
AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain con... 29 9.5
AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain con... 29 9.5
AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain con... 29 9.5
AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain con... 29 9.5
AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain con... 29 9.5
AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain con... 29 9.5
AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain con... 29 9.5
AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain con... 29 9.5
AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens ... 29 9.5
AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransfera... 29 9.5
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 233 bits (571), Expect = 2e-61
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 233 bits (571), Expect = 2e-61
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 233 bits (571), Expect = 2e-61
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 233 bits (571), Expect = 2e-61
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 233 bits (571), Expect = 2e-61
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 233 bits (571), Expect = 2e-61
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 158
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 190 bits (462), Expect = 3e-48
Identities = 88/135 (65%), Positives = 103/135 (76%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 203
MKA G LREY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 204 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 383
V NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 TVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 384 AHSIQIIKVEVIKAA 428
AHSIQI+ VE I A+
Sbjct: 121 AHSIQIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 147 bits (356), Expect = 2e-35
Identities = 65/82 (79%), Positives = 71/82 (86%)
Frame = +3
Query: 252 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 431
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 432 CRRPQVKQFHNSTIRFPLPKRV 497
CRRP VKQFH+S I+FPLP RV
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRV 122
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 83.4 bits (197), Expect = 4e-16
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +3
Query: 354 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV 497
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRV 48
>X04325-1|CAA27856.1| 283|Homo sapiens protein ( Human liver mRNA
for gap junction protein. ).
Length = 283
Score = 29.1 bits (62), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 253 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 98
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 97 GLGSFSDGSLRPI 59
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BT019329-1|AAV38136.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa (connexin 32, Charcot-Marie-Tooth neuropath
protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 253 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 98
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 97 GLGSFSDGSLRPI 59
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BC039198-1|AAH39198.1| 283|Homo sapiens GJB1 protein protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 253 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 98
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 97 GLGSFSDGSLRPI 59
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BC031010-1|AAH31010.1| 428|Homo sapiens SMYD3 protein protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>BC022426-1|AAH22426.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 253 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 98
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 97 GLGSFSDGSLRPI 59
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>BC017079-1|AAH17079.2| 287|Homo sapiens SMYD3 protein protein.
Length = 287
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 76 NGPHLLLRAVRDIEVGEELTICYLDM 101
>BC002805-1|AAH02805.1| 283|Homo sapiens gap junction protein, beta
1, 32kDa protein.
Length = 283
Score = 29.1 bits (62), Expect = 9.5
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -2
Query: 253 FLILMGLFSGISLIETISPVVFLNFLSCLRKYQKR----DLATIGSGEKILILYK----G 98
F + M SGI +I ++ VV+L +C R+ Q+R G G ++ YK
Sbjct: 190 FTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEIN 249
Query: 97 GLGSFSDGSLRPI 59
L S DGSL+ I
Sbjct: 250 KLLSEQDGSLKDI 262
>AY186742-1|AAO31695.1| 258|Homo sapiens hypothetical protein
FLJ21080 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-3|CAI14746.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL512412-2|CAI14745.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL512412-1|CAI14744.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL445468-3|CAI16630.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL445468-2|CAI16629.1| 258|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 47 NGPHLLLRAVRDIEVGEELTICYLDM 72
>AL445468-1|CAI16628.1| 239|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 239
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 28 NGPHLLLRAVRDIEVGEELTICYLDM 53
>AL358859-1|CAI15419.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AL356583-1|CAI16395.1| 428|Homo sapiens SET and MYND domain
containing 3 protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
>AK024733-1|BAB14981.1| 369|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21080 fis, clone CAS02449. ).
Length = 369
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 158 NGPHLLLRAVRDIEVGEELTICYLDM 183
>AB057595-1|BAB86333.1| 428|Homo sapiens histone methyltransferase
protein.
Length = 428
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 285 SGVHNMYREYRDLSVGGAVTQCYRDM 362
+G H + R RD+ VG +T CY DM
Sbjct: 217 NGPHLLLRAVRDIEVGEELTICYLDM 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,309,969
Number of Sequences: 237096
Number of extensions: 1536353
Number of successful extensions: 3291
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3291
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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