Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8b10
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    31   0.49 
Z72502-9|CAE17688.1|  300|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z75554-7|CAA99960.1|  297|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    27   6.0  

>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -3

Query: 226 FFYNKIIFSYTIFNSNLLKCIIYFLVRFSIKAY 128
           FFY  ++FSY +F++ +L  I+ +L+    +AY
Sbjct: 55  FFYKMVLFSYFLFSTFILYFIVLYLIVRDSQAY 87


>Z72502-9|CAE17688.1|  300|Caenorhabditis elegans Hypothetical
           protein C08B6.12 protein.
          Length = 300

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -2

Query: 359 LFNTLLLASS*KKRVVHGNSSYKYFMNRDE*KGYFDNILKSTPRFFLQ*NHFFLHYF*LK 180
           +FN +LL    KKRV+H        +  +    +  NIL   P FF Q +  F  +  +K
Sbjct: 18  IFNAILLVMLEKKRVIHSRVYMFNMIVSEIFMNFTQNILVEFPYFFTQ-DPAFYSFEIVK 76

Query: 179 FIKMY 165
           F++++
Sbjct: 77  FVEIF 81


>Z75554-7|CAA99960.1|  297|Caenorhabditis elegans Hypothetical
           protein ZC455.9 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 262 VILIIS*KAPHAFFYNKIIFSYTIFNSNLLKCIIYFLVRFSIK 134
           V L IS  +P   F+ KI+F  T+ +SN+L    +     SI+
Sbjct: 67  VALDISYLSPFFLFHYKILFVVTLLSSNILSTRFFLAALISIE 109


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 417 CVGTQVVL*TNAAAPASSVAF*YAFISFFLKKACGAW 307
           C GT  VL T+ A P     F   F  FF ++ C  W
Sbjct: 802 CFGTVPVLITSVALPFILSIFLLVFTKFFDRQDCFCW 838


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 417 CVGTQVVL*TNAAAPASSVAF*YAFISFFLKKACGAW 307
           C GT  VL T+ A P     F   F  FF ++ C  W
Sbjct: 784 CFGTVPVLITSVALPFILSIFLLVFTKFFDRQDCFCW 820


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,220,116
Number of Sequences: 27780
Number of extensions: 161879
Number of successful extensions: 270
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)