Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt8b05
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 213 7e-56
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 213 7e-56
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 213 7e-56
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 213 7e-56
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 197 5e-51
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 197 5e-51
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 86 1e-17
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 86 1e-17
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.10
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.23
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.23
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 31 0.41
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 1.6
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 2.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 2.9
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 2.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 2.9
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 2.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 2.9
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 3.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 3.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 3.8
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 3.8
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 28 3.8
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 5.0
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 28 5.0
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 5.0
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 28 5.0
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 5.0
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 5.0
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 5.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 5.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 5.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 5.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 5.0
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.6
Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 27 8.7
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 8.7
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 27 8.7
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 27 8.7
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 213 bits (520), Expect = 7e-56
Identities = 107/148 (72%), Positives = 119/148 (80%), Gaps = 1/148 (0%)
Frame = +1
Query: 100 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 279
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 280 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPX 456
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 457 LFVGMILILIFAEVLGLYGLIVAIYLYT 540
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 33.9 bits (74), Expect = 0.076
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 316 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPXLFVGMILILIFAE 495
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 496 VLGLYGLIVAIYLYTK 543
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 213 bits (520), Expect = 7e-56
Identities = 107/148 (72%), Positives = 119/148 (80%), Gaps = 1/148 (0%)
Frame = +1
Query: 100 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 279
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 280 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPX 456
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 457 LFVGMILILIFAEVLGLYGLIVAIYLYT 540
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 33.9 bits (74), Expect = 0.076
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 316 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPXLFVGMILILIFAE 495
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 496 VLGLYGLIVAIYLYTK 543
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 213 bits (520), Expect = 7e-56
Identities = 107/148 (72%), Positives = 119/148 (80%), Gaps = 1/148 (0%)
Frame = +1
Query: 100 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 279
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 280 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPX 456
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 457 LFVGMILILIFAEVLGLYGLIVAIYLYT 540
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 33.9 bits (74), Expect = 0.076
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 316 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPXLFVGMILILIFAE 495
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 496 VLGLYGLIVAIYLYTK 543
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 213 bits (520), Expect = 7e-56
Identities = 107/148 (72%), Positives = 119/148 (80%), Gaps = 1/148 (0%)
Frame = +1
Query: 100 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 279
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 280 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPX 456
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTA QP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 457 LFVGMILILIFAEVLGLYGLIVAIYLYT 540
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 33.9 bits (74), Expect = 0.076
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 316 EPANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQPXLFVGMILILIFAE 495
E A Y + G++ + G A G A VG + +P L + ++ +I A
Sbjct: 9 ERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAG 66
Query: 496 VLGLYGLIVAIYLYTK 543
++G+YGL+VA+ L K
Sbjct: 67 IIGIYGLVVAMVLKGK 82
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 197 bits (480), Expect = 5e-51
Identities = 94/147 (63%), Positives = 117/147 (79%), Gaps = 1/147 (0%)
Frame = +1
Query: 97 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 276
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 277 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 453
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR + QP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 454 XLFVGMILILIFAEVLGLYGLIVAIYL 534
+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 197 bits (480), Expect = 5e-51
Identities = 94/147 (63%), Positives = 117/147 (79%), Gaps = 1/147 (0%)
Frame = +1
Query: 97 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 276
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 277 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAXQP 453
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR + QP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 454 XLFVGMILILIFAEVLGLYGLIVAIYL 534
+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 86.2 bits (204), Expect = 1e-17
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +1
Query: 121 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 300
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 301 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 438
G L E + P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 439 TAXQPXLFVGMILILIFAEVLGLYGLIVAI 528
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 352 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAXQPXLFVGMILILIFAEVLGLYGLI 519
H+ AGL +GFS L AG+ I G + + G P + ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 520 VAIYLYTK 543
+A K
Sbjct: 109 MAFVFVGK 116
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 86.2 bits (204), Expect = 1e-17
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +1
Query: 121 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 300
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 301 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 438
G L E + P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 439 TAXQPXLFVGMILILIFAEVLGLYGLIVAI 528
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 352 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAXQPXLFVGMILILIFAEVLGLYGLI 519
H+ AGL +GFS L AG+ I G + + G P + ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 520 VAIYLYTK 543
+A K
Sbjct: 109 MAFVFVGK 116
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.10
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 234 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 317
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 333 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 235
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 333 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 235
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +2
Query: 11 SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 169
SE V ++ F TC + + T + +QS ++ W R +L +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342
Query: 170 ELPSQE 187
++P +E
Sbjct: 343 KMPDRE 348
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 434 RTPASPTMPMAKPAARPENPTAKPAPK 354
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 434 RTPASPTMPMAKPAARPENPTAKPAPK 354
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 264 YCHLRSGRGCPDCWCPPGASQ 326
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 440 VPRTPASPTMPMAKPAARPENPTAKPAPK 354
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 246 CRHGGYYCHLRSGRGCPDCWCPPGASQ 326
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 264 YCHLRSGRGCPDCWCPPGASQ 326
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 534 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLXSSTTHACISHDAYGETGSQTRE 379
++DG++ K + K KNH+D E L ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 264 YCHLRSGRGCPDCWCPPGASQ 326
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 393 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 217
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 216 PH 211
H
Sbjct: 82 DH 83
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 437 PRTPASPTMPMAKPAARPENPTAKPAPK 354
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 437 PRTPASPTMPMAKPAARPENPTAKPAPK 354
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 214 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 339
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 506 RPNTSAKIRIRIIPTNNXGX*AVPRTPA-SPTMPMAKPAARPENPTA 369
RP+++A+ R+ + +N G P P+ S TMP P+A P N A
Sbjct: 719 RPSSTAEFRV--VASNKHGP-GKPSLPSYSVTMPQQPPSAAPRNVAA 762
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 267 CHLRSGR-GCPDCWCPPGASQLPP 335
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 437 PRTPASPTMPMAKPAARPENPTAKPAP 357
P P P P + AA PE+P P P
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGP 213
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 246 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 371
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 534 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLXSSTTHACISHDAYGE 400
++DG++ K + K KNH+D E L ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 246 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 371
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 534 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLXSSTTHACISHDAYGE 400
++DG++ K + K KNH+D E L ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -1
Query: 441 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 265
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 264 N 262
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -1
Query: 441 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 265
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 264 N 262
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -1
Query: 441 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQTVDGN 265
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 264 N 262
N
Sbjct: 669 N 669
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 437 PRTPASPTM--PMAKPAARPENPTAKPAPK 354
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 437 PRTPASPTM--PMAKPAARPENPTAKPAPK 354
PRTP +P + P +P A P A+P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 437 PRTPASPTM--PMAKPAARPENPTAKPAPK 354
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 437 PRTPASPTM--PMAKPAARPENPTAKPAPK 354
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 437 PRTPASPTMPMAKPAARPEN--PTAKPAPKWMNP 342
P PA P+MP + A+PE P P P P
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQP 595
>Z82286-5|CAB05311.1| 130|Caenorhabditis elegans Hypothetical
protein W02A2.8 protein.
Length = 130
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Frame = +3
Query: 225 DHEVDHSCRHGGY-YCHLR-----SGRGCPDCWCPPGA 320
DH+VD + YCHLR + R CPD W GA
Sbjct: 42 DHDVDRTIYDIPLEYCHLRIPKSRTSRSCPDPWRRYGA 79
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 428 PASPTMPMAKPAARPENPTAKPAP 357
PA P A PAA P+ A+PAP
Sbjct: 507 PAPAPAPEAAPAAAPDAAPAEPAP 530
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -1
Query: 354 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHHR 205
+ P K G L+ N+ + Q +DG DDRN + D+L HR
Sbjct: 676 LQNPNAKSHSGPSLDHLKNKTT--QRIDGQRFDPDDRNAKKADRLNSQHR 723
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 437 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 342
PR+P PM P+ + P P+P+ NP
Sbjct: 152 PRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP 183
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 437 PRTPASPTMPMAKPAARPENPTAKPAPK 354
P P SP+ P P +RP+ P P+
Sbjct: 36 PPRPPSPSRPQRPPPSRPQRPPPPRQPR 63
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 506 RPNTSAKIRIRIIPTNNXGX*AVPRTPASPTMPMAKPAARPENPTAKP 363
RP T A R+R P PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLAQ--TPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 506 RPNTSAKIRIRIIPTNNXGX*AVPRTPASPTMPMAKPAARPENPTAKP 363
RP T A R+R P PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLAQ--TPRPPVVTTQRPAPPQSRPPPVTRRP 127
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 428 PASPTMPMAKPAARPENPTAKPAPK 354
P+S +P A+P+A P KP PK
Sbjct: 668 PSSSEVPPAEPSAPEPKPAPKPDPK 692
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,557,162
Number of Sequences: 27780
Number of extensions: 299285
Number of successful extensions: 1224
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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