Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt8b03
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   7.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.7  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   9.7  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 479 PRVQERRFQEIRE 441
           P +QER F+EI E
Sbjct: 16  PDIQERIFEEIEE 28


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 428 QLRAKALRQCPQHQRDQRQSR 366
           ++RAK     P +  D+R+SR
Sbjct: 316 KVRAKTQNATPANNNDKRKSR 336


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 367 GRTVHVDDDLDEGSAISAGDSHRGTFNN 284
           GR V   DD+   S   AGD  R +F +
Sbjct: 24  GRRVVDCDDVSSVSQSEAGDEDRFSFTS 51


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 428 QLRAKALRQCPQHQRDQRQSR 366
           ++RAK     P +  D+R+SR
Sbjct: 316 KVRAKTQNATPANNNDKRKSR 336


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 479 PRVQERRFQEIRE 441
           P +QE+ +QE+R+
Sbjct: 16  PEIQEKVYQELRD 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,877
Number of Sequences: 336
Number of extensions: 2247
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)